RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 FAM222BQ8WU58 562 aa11.14□□□□□ -0.63
SPTLC1-204ENST00000469778 PRSS50Q9UI38 385 aa11.14□□□□□ -0.63
SPTLC1-204ENST00000469778 ZNF346Q9UL40 294 aaKnown RBP11.14□□□□□ -0.63
SPTLC1-204ENST00000469778 POFUT2Q9Y2G5 429 aa11.14□□□□□ -0.63
SPTLC1-204ENST00000469778 RRP9O43818 475 aaKnown RBP11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 UPK3AO75631 287 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 SERPINI2O75830 405 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 CLDN1O95832 211 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 HMGN1P05114 100 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 RNF224P0DH78 156 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 PGA4P0DJD7 388 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 PGA3P0DJD8 388 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 ZNF26P17031 533 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 IGHV1-2P23083 117 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 NOS3P29474 1203 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 ACVR1BP36896 505 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 GUCA1AP43080 201 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 KIR2DL3P43628 341 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 CLRN1P58418 232 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 ESRRGP62508 458 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 FAM27E3Q08E93 113 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 PPP1R8Q12972 351 aaKnown RBP11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 CAMK2DQ13557 499 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 TIMM23BQ5SRD1 257 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 SP5Q6BEB4 398 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 ANKRD16Q6P6B7 361 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 DPPA2Q7Z7J5 298 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 TMEM179BQ7Z7N9 219 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 AMIGO2Q86SJ2 522 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 CXorf67Q86X51 503 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 MEX3DQ86XN8 651 aaKnown RBP11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 LNX2Q8N448 690 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 ZNF433Q8N7K0 673 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 OR2T33Q8NG76 320 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 ZNF519Q8TB69 540 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 GTPBP3Q969Y2 492 aaKnown RBP11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 MUCL1Q96DR8 90 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 KCNK17Q96T54 332 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 RBM4BQ9BQ04 359 aaKnown RBP11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 EMC6Q9BV81 110 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 IFT27Q9BW83 186 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 RBM4Q9BWF3 364 aaKnown RBP11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 CRLF2Q9HC73 371 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 GPR35Q9HC97 309 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 NGBQ9NPG2 151 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 NPDC1Q9NQX5 325 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 PAPOLBQ9NRJ5 636 aaKnown RBP11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 ZNF226Q9NYT6 803 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 KIF17Q9P2E2 1029 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 PLEKHB1Q9UF11 243 aaPredicted RBP11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 KCNN3Q9UGI6 736 aa11.13□□□□□ -0.63
SPTLC1-204ENST00000469778 CIB4A0PJX0 185 aa11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 TRMUO75648 421 aaKnown RBP11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 CDH2P19022 906 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 NPR2P20594 1047 aa11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 PRKACGP22612 351 aa11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 GIPRP48546 466 aa11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 ZNF84P51523 738 aa11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 FXYD6P3P58550 94 aa11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 ERVK-25P63136 954 aa11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 ROR2Q01974 943 aaKnown RBP11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 C10orf128Q5T292 105 aa11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 SLC27A4Q6P1M0 643 aa11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 KLHL17Q6TDP4 642 aa11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 BHLHA15Q7RTS1 189 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 TEX47Q8TBZ9 253 aa11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 SAMD8Q96LT4 415 aa11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 ZNF570Q96NI8 536 aa11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 TSPAN32Q96QS1 320 aa11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 PKP2Q99959 881 aa11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 NIPSNAP1Q9BPW8 284 aa11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 WACQ9BTA9 647 aa11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 C9orf16Q9BUW7 83 aa11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 PRRG3Q9BZD7 231 aa11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 ULBP2Q9BZM5 246 aa11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 DCLRE1BQ9H816 532 aa11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 REV1Q9UBZ9 1251 aa11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 OAZ3Q9UMX2 235 aa11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 ORC6Q9Y5N6 252 aa11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 IER3IP1Q9Y5U9 82 aa11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 MAGED1Q9Y5V3 778 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 USP9YO00507 2555 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1-204ENST00000469778 SPTAN1Q13813 2472 aaKnown RBP11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 PRSS37A4D1T9 235 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 OR5H1A6NKK0 313 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 ZNF99A8MXY4 864 aaPredicted RBP11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 H3BN98 237 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 M0R3G1 203 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 CASKO14936 926 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 ARHGEF9O43307 516 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 DHHO43323 396 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 RENP00797 406 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 IFNGP01579 166 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 IGHV3-9P01782 118 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 ITGA5P08648 1049 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 QDPRP09417 244 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 EPXP11678 715 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 COX6B1P14854 86 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 CRABP1P29762 137 aa11.11□□□□□ -0.63
SPTLC1-204ENST00000469778 HOXC12P31275 282 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms