RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 CDCP1Q9H5V8 836 aa12.39□□□□□ -0.43
HDAC6-215ENST00000465457 NRIP3Q9NQ35 241 aa12.39□□□□□ -0.43
HDAC6-215ENST00000465457 HINT3Q9NQE9 182 aaKnown RBP12.39□□□□□ -0.43
HDAC6-215ENST00000465457 HAO2Q9NYQ3 351 aa12.39□□□□□ -0.43
HDAC6-215ENST00000465457 KLRF1Q9NZS2 232 aa12.39□□□□□ -0.43
HDAC6-215ENST00000465457 CRIM1Q9NZV1 1036 aa12.39□□□□□ -0.43
HDAC6-215ENST00000465457 SEC14L4Q9UDX3 406 aa12.39□□□□□ -0.43
HDAC6-215ENST00000465457 CHRNA9Q9UGM1 479 aa12.39□□□□□ -0.43
HDAC6-215ENST00000465457 OSGIN1Q9UJX0 560 aa12.39□□□□□ -0.43
HDAC6-215ENST00000465457 YARS2Q9Y2Z4 477 aaKnown RBP12.39□□□□□ -0.43
HDAC6-215ENST00000465457 SONP18583 2426 aaKnown RBP12.38□□□□□ -0.43
HDAC6-215ENST00000465457 CUBNO60494 3623 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 ARID1AO14497 2285 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 A0A1W2PPW3 197 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 M0R082 166 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 ETV2O00321 342 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-215ENST00000465457 GNB5O14775 395 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 OR2T1O43869 369 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 AIREO43918 545 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 OR2J2O76002 312 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 PPP1R3DO95685 299 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 ASAH2BP0C7U1 165 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 PTNP21246 168 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 HOXC12P31275 282 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 LIPAP38571 399 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 APOBEC1P41238 236 aaKnown RBP12.38□□□□□ -0.43
HDAC6-215ENST00000465457 CLK1P49759 484 aaKnown RBP12.38□□□□□ -0.43
HDAC6-215ENST00000465457 ZNF41P51814 821 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-215ENST00000465457 GAS1P54826 345 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 WNT4P56705 351 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 FBXW4P57775 412 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 ACTC1P68032 377 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 ACTA1P68133 377 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 ITGADQ13349 1161 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 DEFB113Q30KQ7 82 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 GPR139Q6DWJ6 353 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 TMEM211Q6ICI0 200 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 PLBD1Q6P4A8 553 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 LYPD8Q6UX82 237 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 OR52N1Q8NH53 320 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 ERMAPQ96PL5 475 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-215ENST00000465457 RASL10BQ96S79 203 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 TAPBPLQ9BX59 468 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 METTL7AQ9H8H3 244 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 PPP4R1LQ9P1A2 415 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 IL20RAQ9UHF4 553 aa12.38□□□□□ -0.43
HDAC6-215ENST00000465457 NCKAP5O14513 1909 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 TMED7-TICAM2A0A0A6YYA0 188 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 A0A0G2JNJ9 132 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 TXNDC12O95881 172 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 CD14P08571 375 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 TSPAN19P0C672 248 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 HSMCR30P0CW71 290 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 FKBP2P26885 142 aaKnown RBP12.37□□□□□ -0.43
HDAC6-215ENST00000465457 UQCRC1P31930 480 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 UGT2B10P36537 528 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 GPR85P60893 370 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 BDH1Q02338 343 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 SLC35D3Q5M8T2 416 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 FAM69AQ5T7M9 428 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 ARSKQ6UWY0 536 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 TMPRSS11AQ6ZMR5 421 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 BCDIN3DQ7Z5W3 292 aaKnown RBP12.37□□□□□ -0.43
HDAC6-215ENST00000465457 SULF2Q8IWU5 870 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 KLHL36Q8N4N3 616 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 POMGNT2Q8NAT1 580 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 SLC37A3Q8NCC5 494 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 OR5M3Q8NGP4 307 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 DUSP19Q8WTR2 217 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 MRPL48Q96GC5 212 aaKnown RBP12.37□□□□□ -0.43
HDAC6-215ENST00000465457 DCUN1D5Q9BTE7 237 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 RTN4RQ9BZR6 473 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 LIN28AQ9H9Z2 209 aaKnown RBP12.37□□□□□ -0.43
HDAC6-215ENST00000465457 PLSCR2Q9NRY7 297 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 Q9UFV3 132 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 TMED7Q9Y3B3 224 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 FAM215AQ9Y5M1 114 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 WIF1Q9Y5W5 379 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 SPIN1Q9Y657 262 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-215ENST00000465457 KIAA1549Q9HCM3 1950 aa12.37□□□□□ -0.43
HDAC6-215ENST00000465457 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 PINLYPA6NC86 204 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 MCIDASD6RGH6 385 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 ZNF208O43345 1280 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 AKAP8O43823 692 aaKnown RBP12.36□□□□□ -0.43
HDAC6-215ENST00000465457 SUSD5O60279 629 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 NPIPB7O75200 414 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 ITGA10O75578 1167 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 AHSA1O95433 338 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 SSR4P51571 173 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 EGR4Q05215 589 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 ACSM1Q08AH1 577 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 CRMP1Q14194 572 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 DGUOKQ16854 277 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 ZNF791Q3KP31 576 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-215ENST00000465457 ALG10Q5BKT4 473 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 SLC25A53Q5H9E4 307 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 SLC35F1Q5T1Q4 408 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 DESI1Q6ICB0 168 aa12.36□□□□□ -0.43
HDAC6-215ENST00000465457 RTL6Q6ICC9 239 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms