RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 RTL8CO15255 209 aa2.7□□□□□ -1.98
CLK1-208ENST00000464454 HNRNPH3P31942 346 aaKnown RBP2.7□□□□□ -1.98
CLK1-208ENST00000464454 RPS10P46783 165 aaKnown RBP2.7□□□□□ -1.98
CLK1-208ENST00000464454 LHX2P50458 406 aa2.7□□□□□ -1.98
CLK1-208ENST00000464454 GPX6P59796 221 aa2.7□□□□□ -1.98
CLK1-208ENST00000464454 AQP6Q13520 282 aa2.7□□□□□ -1.98
CLK1-208ENST00000464454 CYB5R2Q6BCY4 276 aa2.7□□□□□ -1.98
CLK1-208ENST00000464454 ZNF621Q6ZSS3 439 aa2.7□□□□□ -1.98
CLK1-208ENST00000464454 CAMK2N1Q7Z7J9 78 aa2.7□□□□□ -1.98
CLK1-208ENST00000464454 MDS2Q8NDY4 140 aa2.7□□□□□ -1.98
CLK1-208ENST00000464454 DTX3LQ8TDB6 740 aa2.7□□□□□ -1.98
CLK1-208ENST00000464454 PIBF1Q8WXW3 757 aa2.7□□□□□ -1.98
CLK1-208ENST00000464454 SGK3Q96BR1 496 aa2.7□□□□□ -1.98
CLK1-208ENST00000464454 CENPKQ9BS16 269 aa2.7□□□□□ -1.98
CLK1-208ENST00000464454 NUP58Q9BVL2 599 aa2.7□□□□□ -1.98
CLK1-208ENST00000464454 ILKAPQ9H0C8 392 aaPredicted RBP2.7□□□□□ -1.98
CLK1-208ENST00000464454 ZNF226Q9NYT6 803 aa2.7□□□□□ -1.98
CLK1-208ENST00000464454 STOX2Q9P2F5 926 aaPredicted RBP2.7□□□□□ -1.98
CLK1-208ENST00000464454 DEC1Q9P2X7 70 aa2.7□□□□□ -1.98
CLK1-208ENST00000464454 PCYOX1Q9UHG3 505 aa2.7□□□□□ -1.98
CLK1-208ENST00000464454 GNPTGQ9UJJ9 305 aa2.7□□□□□ -1.98
CLK1-208ENST00000464454 TRAPPC4Q9Y296 219 aa2.7□□□□□ -1.98
CLK1-208ENST00000464454 STARD10Q9Y365 291 aa2.7□□□□□ -1.98
CLK1-208ENST00000464454 TRBV6-6A0A0A6YYG2 114 aa2.69□□□□□ -1.98
CLK1-208ENST00000464454 FAM166BA8MTA8 275 aa2.69□□□□□ -1.98
CLK1-208ENST00000464454 PES1O00541 588 aaKnown RBP2.69□□□□□ -1.98
CLK1-208ENST00000464454 EIF3GO75821 320 aaKnown RBP eCLIP2.69□□□□□ -1.98
CLK1-208ENST00000464454 SLC25A27O95847 323 aa2.69□□□□□ -1.98
CLK1-208ENST00000464454 PCCAP05165 728 aaPredicted RBP2.69□□□□□ -1.98
CLK1-208ENST00000464454 CT62P0C5K7 136 aa2.69□□□□□ -1.98
CLK1-208ENST00000464454 NMUP48645 174 aa2.69□□□□□ -1.98
CLK1-208ENST00000464454 ENPEPQ07075 957 aa2.69□□□□□ -1.98
CLK1-208ENST00000464454 SGCAQ16586 387 aa2.69□□□□□ -1.98
CLK1-208ENST00000464454 ZBED5Q49AG3 693 aa2.69□□□□□ -1.98
CLK1-208ENST00000464454 ARMC12Q5T9G4 340 aa2.69□□□□□ -1.98
CLK1-208ENST00000464454 IGFL2Q6UWQ7 119 aa2.69□□□□□ -1.98
CLK1-208ENST00000464454 ARIH2OSQ8N7S6 290 aa2.69□□□□□ -1.98
CLK1-208ENST00000464454 B3GNT7Q8NFL0 401 aa2.69□□□□□ -1.98
CLK1-208ENST00000464454 OR51G1Q8NGK1 321 aa2.69□□□□□ -1.98
CLK1-208ENST00000464454 RAB3IL1Q8TBN0 382 aa2.69□□□□□ -1.98
CLK1-208ENST00000464454 SLC22A8Q8TCC7 542 aa2.69□□□□□ -1.98
CLK1-208ENST00000464454 GEMIN6Q8WXD5 167 aaKnown RBP2.69□□□□□ -1.98
CLK1-208ENST00000464454 AURKBQ96GD4 344 aaPredicted RBP2.69□□□□□ -1.98
CLK1-208ENST00000464454 RNF185Q96GF1 192 aa2.69□□□□□ -1.98
CLK1-208ENST00000464454 SH3GL3Q99963 347 aa2.69□□□□□ -1.98
CLK1-208ENST00000464454 OSBPL10Q9BXB5 764 aa2.69□□□□□ -1.98
CLK1-208ENST00000464454 GPR61Q9BZJ8 451 aa2.69□□□□□ -1.98
CLK1-208ENST00000464454 ZNF331Q9NQX6 463 aaPredicted RBP2.69□□□□□ -1.98
CLK1-208ENST00000464454 CTPS2Q9NRF8 586 aa2.69□□□□□ -1.98
CLK1-208ENST00000464454 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.69□□□□□ -1.98
CLK1-208ENST00000464454 ARHGAP21Q5T5U3 1957 aa2.69□□□□□ -1.98
CLK1-208ENST00000464454 IGKV1D-13A0A0B4J2D9 117 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 A0A1B0GVI7 797 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 PRSS37A4D1T9 235 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 CTAGE15A4D2H0 777 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 ZNF726A6NNF4 738 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 PPP1R2P9O14990 202 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 HMMRO75330 724 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 FGGP02679 453 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 SMIM10L1P0DMW3 83 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 IGHV3-43DP0DP04 118 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 IGKV1-13P0DP09 117 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 TOP1P11387 765 aaKnown RBP2.68□□□□□ -1.98
CLK1-208ENST00000464454 PSG2P11465 335 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 ADRB3P13945 408 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 ZNF24P17028 368 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 CCR8P51685 355 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 FGF8P55075 233 aaPredicted RBP2.68□□□□□ -1.98
CLK1-208ENST00000464454 IRX3P78415 501 aaPredicted RBP2.68□□□□□ -1.98
CLK1-208ENST00000464454 ZNF92Q03936 586 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 REG3AQ06141 175 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 SMARCB1Q12824 385 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 EIF4EBP2Q13542 120 aaPredicted RBP2.68□□□□□ -1.98
CLK1-208ENST00000464454 IDI1Q13907 227 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 PSG5Q15238 335 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 GUCA2BQ16661 112 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 XKR7Q5GH72 579 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 PIGGQ5H8A4 983 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 CTAGE6Q86UF2 777 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 LIX1Q8N485 282 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 RHEBL1Q8TAI7 183 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 SMIM10Q96HG1 83 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 HDHD3Q9BSH5 251 aaPredicted RBP2.68□□□□□ -1.98
CLK1-208ENST00000464454 INPP5EQ9NRR6 644 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 USP47Q96K76 1375 aa2.68□□□□□ -1.98
CLK1-208ENST00000464454 A0A0B4J2A0 478 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 IGHV3-64DA0A0J9YX35 117 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 SMCO3A2RU48 225 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 RNF13O43567 381 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 ERLIN1O75477 346 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 HOXC4P09017 264 aaPredicted RBP2.67□□□□□ -1.98
CLK1-208ENST00000464454 ZNF43P17038 809 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 TNNT2P45379 298 aaPredicted RBP2.67□□□□□ -1.98
CLK1-208ENST00000464454 RORCP51449 518 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 ACLYP53396 1101 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 UCNP55089 124 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 YWHAGP61981 247 aaKnown RBP eCLIP2.67□□□□□ -1.98
CLK1-208ENST00000464454 RPS21P63220 83 aaKnown RBP2.67□□□□□ -1.98
CLK1-208ENST00000464454 TMEM183BQ1AE95 376 aa2.67□□□□□ -1.98
CLK1-208ENST00000464454 TMEM255AQ5JRV8 349 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms