RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 KLF15Q9UIH9 416 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 ZNF346Q9UL40 294 aaKnown RBP8.33□□□□□ -1.08
HPS4-208ENST00000464362 FAM230AA0A1W2PPH8 454 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 H7C417 338 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 TOR1AO14656 332 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 SRPX2O60687 465 aaPredicted RBP8.32□□□□□ -1.08
HPS4-208ENST00000464362 CTNSO60931 367 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 IL33O95760 270 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 LALBAP00709 142 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 LCATP04180 440 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 CSRP3P50461 194 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 CAV2P51636 162 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 BCL2A1Q16548 175 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 C9orf135Q5VTT2 229 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 MEX3BQ6ZN04 569 aaKnown RBP8.32□□□□□ -1.08
HPS4-208ENST00000464362 CAMKMTQ7Z624 323 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 OR6V1Q8N148 313 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 OR10K1Q8NGX5 313 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 FGF14Q92915 247 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 HHIPL1Q96JK4 782 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 WFDC6Q9BQY6 131 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 HIF3AQ9Y2N7 669 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 BRCA1P38398 1863 aaKnown RBP8.32□□□□□ -1.08
HPS4-208ENST00000464362 TMEM235A6NFC5 223 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 SUSD5O60279 629 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 CTSVO60911 334 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 F10P00742 488 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 SERPINA5P05154 406 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 ZNF14P17017 642 aaPredicted RBP8.32□□□□□ -1.08
HPS4-208ENST00000464362 ATF1P18846 271 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 HTR2CP28335 458 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 LUMP51884 338 aaPredicted RBP8.32□□□□□ -1.08
HPS4-208ENST00000464362 FGL1Q08830 312 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 AGBL4Q5VU57 503 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 LILRA6Q6PI73 481 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 Q6ZTK2 550 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 LRRC18Q8N456 261 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 OR4C3Q8NH37 302 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 HOXB13Q92826 284 aaPredicted RBP8.32□□□□□ -1.08
HPS4-208ENST00000464362 SLC6A18Q96N87 628 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 PBX4Q9BYU1 374 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 PARP12Q9H0J9 701 aaKnown RBP8.32□□□□□ -1.08
HPS4-208ENST00000464362 TCEAL2Q9H3H9 227 aaPredicted RBP8.32□□□□□ -1.08
HPS4-208ENST00000464362 ZNF160Q9HCG1 818 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 MEPEQ9NQ76 525 aaPredicted RBP8.32□□□□□ -1.08
HPS4-208ENST00000464362 ZMAT5Q9UDW3 170 aaKnown RBP8.32□□□□□ -1.08
HPS4-208ENST00000464362 PLEKHB1Q9UF11 243 aaPredicted RBP8.32□□□□□ -1.08
HPS4-208ENST00000464362 SLC23A1Q9UHI7 598 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 MRPS2Q9Y399 296 aaKnown RBP8.32□□□□□ -1.08
HPS4-208ENST00000464362 TDRD6O60522 2096 aaKnown RBP8.32□□□□□ -1.08
HPS4-208ENST00000464362 A0A0A6YYD5 115 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 LGALS8O00214 317 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 PHYHO14832 338 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 PAPLNO95428 1278 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 INHBBP09529 407 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 PI3P19957 117 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 HSD11B2P80365 405 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 HNF4GQ14541 408 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 RAB30Q15771 203 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 ARHGAP11BQ3KRB8 267 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 SLC36A2Q495M3 483 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 TMEM196Q5HYL7 178 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 BEND4Q6ZU67 534 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 TRAPPC6BQ86SZ2 158 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 OR5M1Q8NGP8 315 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 C16orf52Q8NHV5 167 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 HSD17B8Q92506 261 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 TSLPQ969D9 159 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 UPRTQ96BW1 309 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 FGGYQ96C11 551 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 CDC6Q99741 560 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 ANKRD19PQ9H560 264 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 FGF20Q9NP95 211 aaPredicted RBP8.32□□□□□ -1.08
HPS4-208ENST00000464362 REV1Q9UBZ9 1251 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 ATAD5Q96QE3 1844 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 GREB1LQ9C091 1923 aaPredicted RBP8.32□□□□□ -1.08
HPS4-208ENST00000464362 SULT2B1O00204 365 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 GPANK1O95872 356 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 MYF5P13349 255 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 DRD1P21728 446 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 TUBG1P23258 451 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 HMGA2P52926 109 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 TAS2R19P59542 299 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 TEKQ02763 1124 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 EXOSC2Q13868 293 aaKnown RBP8.32□□□□□ -1.08
HPS4-208ENST00000464362 TMEM176BQ3YBM2 270 aaPredicted RBP8.32□□□□□ -1.08
HPS4-208ENST00000464362 FAM74A1Q5RGS3 127 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 TMEM240Q5SV17 173 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 DPY19L2P2Q6ZN68 376 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 ABHD1Q96SE0 405 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 IL20Q9NYY1 176 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 RARRES3Q9UL19 164 aa8.32□□□□□ -1.08
HPS4-208ENST00000464362 COA3Q9Y2R0 106 aaPredicted RBP8.32□□□□□ -1.08
HPS4-208ENST00000464362 TP53I11O14683 189 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 OR8U9P0C7N5 309 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 CD38P28907 300 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 CLDN6P56747 220 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 CLDN20P56880 219 aa8.31□□□□□ -1.08
HPS4-208ENST00000464362 MRPS10P82664 201 aaKnown RBP8.31□□□□□ -1.08
HPS4-208ENST00000464362 PLGLB1Q02325 96 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms