RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 MARCH7Q9H992 704 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 RPRD1BQ9NQG5 326 aaKnown RBP9.67□□□□□ -0.86
PKP4-206ENST00000452162 LHX6Q9UPM6 363 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 EXPH5Q8NEV8 1989 aa9.67□□□□□ -0.86
PKP4-206ENST00000452162 TLN1Q9Y490 2541 aaKnown RBP9.66□□□□□ -0.86
PKP4-206ENST00000452162 A0A0G2JK05 382 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 MASP2O00187 686 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 TMCC2O75069 709 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 NPIPB7O75200 414 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 ALOX12BO75342 701 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 SERPINI2O75830 405 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 CD1AP06126 327 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 THBS2P35442 1172 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 EVX1P49640 407 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 GBX2P52951 348 aaPredicted RBP9.66□□□□□ -0.86
PKP4-206ENST00000452162 EMP2P54851 167 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 QPRTQ15274 297 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 MESTQ5EB52 335 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 ZNF684Q5T5D7 378 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 C1QL3Q5VWW1 255 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 HBMQ6B0K9 141 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 METAP1DQ6UB28 335 aaPredicted RBP9.66□□□□□ -0.86
PKP4-206ENST00000452162 C16orf47Q6ZP98 133 aaPredicted RBP9.66□□□□□ -0.86
PKP4-206ENST00000452162 TPRA1Q86W33 373 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 RPS4Y2Q8TD47 263 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 TXNDC15Q96J42 360 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 NDEL1Q9GZM8 345 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 MOKQ9UQ07 419 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 NPFFR2Q9Y5X5 522 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 HS3ST3B1Q9Y662 390 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 A0A1W2PRG6 482 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 ZNF354AO60765 605 aaPredicted RBP9.66□□□□□ -0.86
PKP4-206ENST00000452162 NUDT14O95848 222 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 HIST1H2ABP04908 130 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 MYL9P24844 172 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 PTBP1P26599 531 aaKnown RBP eCLIP9.66□□□□□ -0.869e-7■■■■■ 35.5
PKP4-206ENST00000452162 GDI2P50395 445 aaKnown RBP9.66□□□□□ -0.86
PKP4-206ENST00000452162 POLR2HP52434 150 aaKnown RBP9.66□□□□□ -0.86
PKP4-206ENST00000452162 SIRPAP78324 504 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 CHAF1BQ13112 559 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 ASAH1Q13510 395 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 RIN1Q13671 783 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 TBR1Q16650 682 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 ACSM3Q53FZ2 586 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 PYDC2Q56P42 97 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 GPR139Q6DWJ6 353 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 POMZP3Q6PJE2 187 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 SPATC1Q76KD6 591 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 HIST3H2AQ7L7L0 130 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 NRARPQ7Z6K4 114 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 RAB43Q86YS6 212 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 CELF2-AS1Q8N7Q2 184 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 OR13C5Q8NGS8 318 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 NUBPLQ8TB37 319 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 SNX33Q8WV41 574 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 HIST1H2ACQ93077 130 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 C8orf44Q96CB5 159 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 MRPL48Q96GC5 212 aaKnown RBP9.66□□□□□ -0.86
PKP4-206ENST00000452162 TSSK2Q96PF2 358 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 WDR77Q9BQA1 342 aaPredicted RBP9.66□□□□□ -0.86
PKP4-206ENST00000452162 ACOXLQ9NUZ1 547 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 GNG8Q9UK08 70 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 ZNF346Q9UL40 294 aaKnown RBP9.66□□□□□ -0.86
PKP4-206ENST00000452162 KCNMB2Q9Y691 235 aa9.66□□□□□ -0.86
PKP4-206ENST00000452162 TMED7-TICAM2A0A0A6YYA0 188 aa9.65□□□□□ -0.86
PKP4-206ENST00000452162 TMEM72A0PK05 275 aa9.65□□□□□ -0.86
PKP4-206ENST00000452162 ARGFXA6NJG6 315 aa9.65□□□□□ -0.86
PKP4-206ENST00000452162 FAM171A2A8MVW0 826 aa9.65□□□□□ -0.86
PKP4-206ENST00000452162 PRR32B1ATL7 298 aa9.65□□□□□ -0.86
PKP4-206ENST00000452162 SUSD5O60279 629 aa9.65□□□□□ -0.86
PKP4-206ENST00000452162 SLC19A2O60779 497 aa9.65□□□□□ -0.86
PKP4-206ENST00000452162 MT-ATP6P00846 226 aa9.65□□□□□ -0.86
PKP4-206ENST00000452162 APEX1P27695 318 aaKnown RBP9.65□□□□□ -0.86
PKP4-206ENST00000452162 SLC26A5P58743 744 aa9.65□□□□□ -0.86
PKP4-206ENST00000452162 RPS11P62280 158 aaKnown RBP eCLIP9.65□□□□□ -0.86
PKP4-206ENST00000452162 SCN1BQ07699 218 aa9.65□□□□□ -0.86
PKP4-206ENST00000452162 EFR3AQ14156 821 aa9.65□□□□□ -0.86
PKP4-206ENST00000452162 LINC00303Q3SY05 128 aa9.65□□□□□ -0.86
PKP4-206ENST00000452162 CCDC58Q4VC31 144 aa9.65□□□□□ -0.86
PKP4-206ENST00000452162 IDNKQ5T6J7 187 aa9.65□□□□□ -0.86
PKP4-206ENST00000452162 RPL22L1Q6P5R6 122 aaKnown RBP9.65□□□□□ -0.86
PKP4-206ENST00000452162 SLC16A9Q7RTY1 509 aa9.65□□□□□ -0.86
PKP4-206ENST00000452162 ADGRG3Q86Y34 549 aa9.65□□□□□ -0.86
PKP4-206ENST00000452162 CHAC2Q8WUX2 184 aa9.65□□□□□ -0.86
PKP4-206ENST00000452162 C17orf50Q8WW18 174 aa9.65□□□□□ -0.86
PKP4-206ENST00000452162 THAP4Q8WY91 577 aa9.65□□□□□ -0.86
PKP4-206ENST00000452162 TTC9Q92623 222 aa9.65□□□□□ -0.86
PKP4-206ENST00000452162 RNF166Q96A37 237 aaPredicted RBP9.65□□□□□ -0.86
PKP4-206ENST00000452162 KCTD12Q96CX2 325 aaKnown RBP9.65□□□□□ -0.86
PKP4-206ENST00000452162 P4HTMQ9NXG6 502 aa9.65□□□□□ -0.86
PKP4-206ENST00000452162 TAS2R5Q9NYW4 299 aa9.65□□□□□ -0.86
PKP4-206ENST00000452162 GRHPRQ9UBQ7 328 aa9.65□□□□□ -0.86
PKP4-206ENST00000452162 TMED7Q9Y3B3 224 aa9.65□□□□□ -0.86
PKP4-206ENST00000452162 TNRC6AQ8NDV7 1962 aaKnown RBP9.65□□□□□ -0.86
PKP4-206ENST00000452162 TRAV1-2A0A0B4J238 106 aa9.65□□□□□ -0.87
PKP4-206ENST00000452162 TMEM200CA6NKL6 621 aa9.65□□□□□ -0.87
PKP4-206ENST00000452162 DCTN6O00399 190 aa9.65□□□□□ -0.87
PKP4-206ENST00000452162 SNPHO15079 494 aa9.65□□□□□ -0.87
PKP4-206ENST00000452162 SERPINA3P01011 423 aa9.65□□□□□ -0.87
PKP4-206ENST00000452162 HLA-DQB1P01920 261 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms