RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 CLDND2Q8NHS1 167 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 RNF217Q8TC41 542 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 MOGAT1Q96PD6 335 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 SYT3Q9BQG1 590 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 HIF1ANQ9NWT6 349 aa9.35□□□□□ -0.91
USP1-204ENST00000452143 WNK2Q9Y3S1 2297 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 TRBV5-3A0A0A0MS03 114 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 A0A1W2PPW3 197 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 SLC22A23A1A5C7 686 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 PLPP3O14495 311 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 POLR3GO15318 223 aaPredicted RBP9.34□□□□□ -0.91
USP1-204ENST00000452143 CHP2O43745 196 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 TPST1O60507 370 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 TGDSO95455 350 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 HPXP02790 462 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 SERPINA5P05154 406 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 SLC6A2P23975 617 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 ALDH3B1P43353 468 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 SCARB2Q14108 478 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 NRN1LQ496H8 165 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 ZNF613Q6PF04 617 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 SHQ1Q6PI26 577 aaKnown RBP9.34□□□□□ -0.91
USP1-204ENST00000452143 BLOC1S3Q6QNY0 202 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 C12orf54Q6X4T0 127 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 DPPA2Q7Z7J5 298 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 ARMC8Q8IUR7 673 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 ZNF584Q8IVC4 421 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.34□□□□□ -0.91
USP1-204ENST00000452143 HIPK4Q8NE63 616 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 OR5J2Q8NH18 312 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 OR6X1Q8NH79 312 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 SPDL1Q96EA4 605 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 TXNDC15Q96J42 360 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 C1orf198Q9H425 327 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 METTL17Q9H7H0 456 aaPredicted RBP9.34□□□□□ -0.91
USP1-204ENST00000452143 TCF7L2Q9NQB0 619 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 ZNF275Q9NSD4 429 aaPredicted RBP9.34□□□□□ -0.91
USP1-204ENST00000452143 VAPAQ9P0L0 249 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 MYEF2Q9P2K5 600 aaKnown RBP9.34□□□□□ -0.91
USP1-204ENST00000452143 GPR160Q9UJ42 338 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 ANGPT4Q9Y264 503 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 USH1CQ9Y6N9 552 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 DYSFO75923 2080 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 PKD1L1Q8TDX9 2849 aa9.34□□□□□ -0.91
USP1-204ENST00000452143 TRAV20A0A0B4J274 112 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 EVPLLA8MZ36 301 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 FAM157AC9JC47 383 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 RP2O75695 350 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 NCR1O76036 304 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 FARS2O95363 451 aaKnown RBP9.33□□□□□ -0.92
USP1-204ENST00000452143 SNAP29O95721 258 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 PNPP00491 289 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 VIMP08670 466 aaKnown RBP9.33□□□□□ -0.92
USP1-204ENST00000452143 ADORA3P0DMS8 318 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 OR8G3PP0DMU2 310 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 GAAP10253 952 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 GPX2P18283 190 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 AHCYP23526 432 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 AQP5P55064 265 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 CDH12P55289 794 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 BIDP55957 195 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 SELENOVP59797 346 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 MAD2L1BPQ15013 274 aaPredicted RBP9.33□□□□□ -0.92
USP1-204ENST00000452143 NKPD1Q17RQ9 610 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 PCGF3Q3KNV8 242 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 RGS7BPQ6MZT1 257 aaPredicted RBP9.33□□□□□ -0.92
USP1-204ENST00000452143 LRP11Q86VZ4 500 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 FUNDC1Q8IVP5 155 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 C10orf111Q8N326 155 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 SLC22A24Q8N4F4 322 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 C10orf53Q8N6V4 93 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 ZNF418Q8TF45 676 aaPredicted RBP9.33□□□□□ -0.92
USP1-204ENST00000452143 SNX33Q8WV41 574 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 TMEM54Q969K7 222 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 ZNF566Q969W8 418 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 ZMYND19Q96E35 227 aaPredicted RBP9.33□□□□□ -0.92
USP1-204ENST00000452143 C7orf26Q96N11 449 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 SLCO1B3Q9NPD5 702 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 TMEM38BQ9NVV0 291 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 GLTPQ9NZD2 209 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 CCDC167Q9P0B6 97 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 SLAMF8Q9P0V8 285 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 DUSP13Q9UII6 198 aa9.33□□□□□ -0.92
USP1-204ENST00000452143 IGLV3-9A0A075B6K5 115 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 LRRN3E7EW58 273 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 PPIHO43447 177 aaKnown RBP9.32□□□□□ -0.92
USP1-204ENST00000452143 TPST2O60704 377 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 SERPINI2O75830 405 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 MFN2O95140 757 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 OR6A2O95222 327 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 VENTXO95231 258 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 PTHP01270 115 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 NAT2P11245 290 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 ANPEPP15144 967 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 TCN1P20061 433 aaPredicted RBP9.32□□□□□ -0.92
USP1-204ENST00000452143 COL8A2P25067 703 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 CFPP27918 469 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 AQP1P29972 269 aa9.32□□□□□ -0.92
USP1-204ENST00000452143 COMPP49747 757 aaPredicted RBP9.32□□□□□ -0.92
USP1-204ENST00000452143 SEC24CP53992 1094 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms