RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 CLDN22Q8N7P3 220 aa15.24■□□□□ 0.03
LIME1-202ENST00000444951 OR4Q3Q8NH05 313 aa15.24■□□□□ 0.03
LIME1-202ENST00000444951 CA5BP1Q8WTZ4 195 aa15.24■□□□□ 0.03
LIME1-202ENST00000444951 Q96M85 177 aa15.24■□□□□ 0.03
LIME1-202ENST00000444951 ZFP3Q96NJ6 502 aa15.24■□□□□ 0.03
LIME1-202ENST00000444951 TACO1Q9BSH4 297 aaKnown RBP15.24■□□□□ 0.03
LIME1-202ENST00000444951 TXNIPQ9H3M7 391 aa15.24■□□□□ 0.03
LIME1-202ENST00000444951 GP6Q9HCN6 339 aa15.24■□□□□ 0.03
LIME1-202ENST00000444951 FANCFQ9NPI8 374 aa15.24■□□□□ 0.03
LIME1-202ENST00000444951 NPDC1Q9NQX5 325 aaPredicted RBP15.24■□□□□ 0.03
LIME1-202ENST00000444951 RNF6Q9Y252 685 aa15.24■□□□□ 0.03
LIME1-202ENST00000444951 C2CD3Q4AC94 2353 aa15.24■□□□□ 0.03
LIME1-202ENST00000444951 SPG11Q96JI7 2443 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 NKX2-6A6NCS4 301 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 FAM90A27PA6NNH2 459 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 H7C1C5 153 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 AKAP8O43823 692 aaKnown RBP15.23■□□□□ 0.03
LIME1-202ENST00000444951 SNAP29O95721 258 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 EDNRAP25101 427 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 EPHA2P29317 976 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 PTDSS1P48651 473 aaKnown RBP15.23■□□□□ 0.03
LIME1-202ENST00000444951 LCN6P62502 163 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 TLE4Q04727 773 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 TFF3Q07654 80 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 LGALS3BPQ08380 585 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 NHLRC1Q6VVB1 395 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 BTLAQ7Z6A9 289 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 UBE2J2Q8N2K1 259 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 PARP8Q8N3A8 854 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 SYT14Q8NB59 555 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 OR2T33Q8NG76 320 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 ASB10Q8WXI3 467 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 C14orf79Q96F83 325 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 OR2M2Q96R28 347 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 GPX7Q96SL4 187 aaPredicted RBP15.23■□□□□ 0.03
LIME1-202ENST00000444951 VCXQ9H320 206 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 TOR3AQ9H497 397 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 NRIP3Q9NQ35 241 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 PARPBPQ9NWS1 579 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 MED12LQ86YW9 2145 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 DOCK7Q96N67 2140 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 MED13LQ71F56 2210 aa15.23■□□□□ 0.03
LIME1-202ENST00000444951 EEF1E1-BLOC1S5C9J1V9 151 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 BHLHE40O14503 412 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 ARHGEF9O43307 516 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 EEF1E1O43324 174 aaKnown RBP15.22■□□□□ 0.03
LIME1-202ENST00000444951 SLC43A1O75387 559 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 TNFSF13O75888 250 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 KRT33AO76009 404 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 CRHP06850 196 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 IGFBP2P18065 325 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 CLRN1P58418 232 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 ESRRGP62508 458 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 MYBPC1Q00872 1141 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 RUNX1T1Q06455 604 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 NPRL3Q12980 569 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 KRR1Q13601 381 aaKnown RBP15.22■□□□□ 0.03
LIME1-202ENST00000444951 PTGES3Q15185 160 aaKnown RBP15.22■□□□□ 0.03
LIME1-202ENST00000444951 GUSBP1Q15486 140 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 PGGHGQ32M88 737 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 SLC27A4Q6P1M0 643 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 PACRGLQ8N7B6 248 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 OR6K3Q8NGY3 331 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 OR6N1Q8NGY5 312 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 OR4K13Q8NH42 304 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 TMEM45BQ96B21 275 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 APH1AQ96BI3 265 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 STARD4Q96DR4 205 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 MBOAT4Q96T53 435 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 SFXN3Q9BWM7 321 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 OPN3Q9H1Y3 402 aaPredicted RBP15.22■□□□□ 0.03
LIME1-202ENST00000444951 COQ3Q9NZJ6 369 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 ENOPH1Q9UHY7 261 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 PRSS50Q9UI38 385 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 PROCRQ9UNN8 238 aa15.22■□□□□ 0.03
LIME1-202ENST00000444951 ZNF469Q96JG9 3925 aaPredicted RBP15.21■□□□□ 0.03
LIME1-202ENST00000444951 XKRYO14609 159 aa15.21■□□□□ 0.03
LIME1-202ENST00000444951 IGHMP01871 453 aa15.21■□□□□ 0.03
LIME1-202ENST00000444951 ACADSP16219 412 aa15.21■□□□□ 0.03
LIME1-202ENST00000444951 SDHAP31040 664 aa15.21■□□□□ 0.03
LIME1-202ENST00000444951 OPRM1P35372 400 aa15.21■□□□□ 0.03
LIME1-202ENST00000444951 GIPRP48546 466 aa15.21■□□□□ 0.03
LIME1-202ENST00000444951 MESTQ5EB52 335 aa15.21■□□□□ 0.03
LIME1-202ENST00000444951 ARMC4Q5T2S8 1044 aa15.21■□□□□ 0.03
LIME1-202ENST00000444951 GPR139Q6DWJ6 353 aa15.21■□□□□ 0.03
LIME1-202ENST00000444951 ACSM5Q6NUN0 579 aa15.21■□□□□ 0.03
LIME1-202ENST00000444951 FAM122BQ7Z309 247 aa15.21■□□□□ 0.03
LIME1-202ENST00000444951 LUZP2Q86TE4 346 aa15.21■□□□□ 0.03
LIME1-202ENST00000444951 JAZF1Q86VZ6 243 aa15.21■□□□□ 0.03
LIME1-202ENST00000444951 LIX1LQ8IVB5 337 aa15.21■□□□□ 0.03
LIME1-202ENST00000444951 ARIH2OSQ8N7S6 290 aa15.21■□□□□ 0.03
LIME1-202ENST00000444951 OR52E2Q8NGJ4 325 aa15.21■□□□□ 0.03
LIME1-202ENST00000444951 OR6X1Q8NH79 312 aa15.21■□□□□ 0.03
LIME1-202ENST00000444951 ZNF519Q8TB69 540 aa15.21■□□□□ 0.03
LIME1-202ENST00000444951 ZNF566Q969W8 418 aa15.21■□□□□ 0.03
LIME1-202ENST00000444951 ADAD1Q96M93 576 aaKnown RBP15.21■□□□□ 0.03
LIME1-202ENST00000444951 GABARAPL3Q9BY60 117 aa15.21■□□□□ 0.03
LIME1-202ENST00000444951 VCX3BQ9H321 246 aa15.21■□□□□ 0.03
LIME1-202ENST00000444951 SMPD3Q9NY59 655 aaPredicted RBP15.21■□□□□ 0.03
LIME1-202ENST00000444951 RCE1Q9Y256 329 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms