RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 CCKBRP32239 447 aa11.58□□□□□ -0.55
DDX56-204ENST00000431640 CASP3P42574 277 aa11.58□□□□□ -0.55
DDX56-204ENST00000431640 ZP4Q12836 540 aa11.58□□□□□ -0.55
DDX56-204ENST00000431640 SELENBP1Q13228 472 aa11.58□□□□□ -0.55
DDX56-204ENST00000431640 P2RY14Q15391 338 aa11.58□□□□□ -0.55
DDX56-204ENST00000431640 FAM27D1Q5T7N8 215 aa11.58□□□□□ -0.55
DDX56-204ENST00000431640 HES3Q5TGS1 186 aa11.58□□□□□ -0.55
DDX56-204ENST00000431640 PYHIN1Q6K0P9 492 aa11.58□□□□□ -0.55
DDX56-204ENST00000431640 YIPF7Q8N8F6 280 aa11.58□□□□□ -0.55
DDX56-204ENST00000431640 DUSP18Q8NEJ0 188 aa11.58□□□□□ -0.55
DDX56-204ENST00000431640 TRMT10AQ8TBZ6 339 aaKnown RBP11.58□□□□□ -0.55
DDX56-204ENST00000431640 ENKURQ8TC29 256 aa11.58□□□□□ -0.55
DDX56-204ENST00000431640 ASB17Q8WXJ9 295 aa11.58□□□□□ -0.55
DDX56-204ENST00000431640 THRSPQ92748 146 aa11.58□□□□□ -0.55
DDX56-204ENST00000431640 HGDQ93099 445 aa11.58□□□□□ -0.55
DDX56-204ENST00000431640 TSSK2Q96PF2 358 aa11.58□□□□□ -0.55
DDX56-204ENST00000431640 NEDD4LQ96PU5 975 aa11.58□□□□□ -0.55
DDX56-204ENST00000431640 INTS14Q96SY0 518 aa11.58□□□□□ -0.55
DDX56-204ENST00000431640 KLHDC3Q9BQ90 382 aa11.58□□□□□ -0.55
DDX56-204ENST00000431640 CRB3Q9BUF7 120 aa11.58□□□□□ -0.55
DDX56-204ENST00000431640 TTTY10Q9BZA0 68 aa11.58□□□□□ -0.55
DDX56-204ENST00000431640 WDR54Q9H977 334 aa11.58□□□□□ -0.55
DDX56-204ENST00000431640 RBFOX1Q9NWB1 397 aaKnown RBP11.58□□□□□ -0.55
DDX56-204ENST00000431640 LINC00854A0A1B0GVQ3 168 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 PRSS37A4D1T9 235 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 C11orf98E9PRG8 122 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 MEN1O00255 615 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 PLPP3O14495 311 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 ZNF208O43345 1280 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 FZD7O75084 574 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 EPXP11678 715 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 ALOX5APP20292 161 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 AHCYP23526 432 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 PSMB10P40306 273 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 NR4A2P43354 598 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 MAP2K3P46734 347 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 FBXW4P57775 412 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 ALKBH1Q13686 389 aaKnown RBP11.58□□□□□ -0.56
DDX56-204ENST00000431640 C1QL3Q5VWW1 255 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 SPATC1Q76KD6 591 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 MFSD8Q8NHS3 518 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 SLC22A8Q8TCC7 542 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 RNF138Q8WVD3 245 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 ADAMTS14Q8WXS8 1223 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 DDIT4LQ96D03 193 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 FRMD6Q96NE9 622 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 CTRCQ99895 268 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 WDR77Q9BQA1 342 aaPredicted RBP11.58□□□□□ -0.56
DDX56-204ENST00000431640 SLITRK2Q9H156 845 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 SYT4Q9H2B2 425 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 SACM1LQ9NTJ5 587 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 VSX1Q9NZR4 365 aaPredicted RBP11.58□□□□□ -0.56
DDX56-204ENST00000431640 GPN3Q9UHW5 284 aaPredicted RBP11.58□□□□□ -0.56
DDX56-204ENST00000431640 PAIP2BQ9ULR5 123 aaKnown RBP11.58□□□□□ -0.56
DDX56-204ENST00000431640 B9D1Q9UPM9 204 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 PTPRBP23467 1997 aa11.58□□□□□ -0.56
DDX56-204ENST00000431640 SEC16AO15027 2179 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 MEIOCA2RUB1 952 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 HMX3A6NHT5 357 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 A6NIZ1 184 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 ADAM10O14672 748 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 UPK3AO75631 287 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 CCNKO75909 580 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 MT-CO3P00414 261 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 KLK3P07288 261 aaPredicted RBP11.57□□□□□ -0.56
DDX56-204ENST00000431640 CSRP1P21291 193 aaKnown RBP11.57□□□□□ -0.56
DDX56-204ENST00000431640 CRABP1P29762 137 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 OR10A3P58181 314 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 RAP1BP61224 184 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 RAP1AP62834 184 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 CBX3Q13185 183 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 ACKR1Q16570 336 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 CEP78Q5JTW2 689 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 LIPNQ5VXI9 398 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 MRPL14Q6P1L8 145 aaKnown RBP11.57□□□□□ -0.56
DDX56-204ENST00000431640 PLET1Q6UQ28 207 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 PM20D2Q8IYS1 436 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 OR13C5Q8NGS8 318 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 OR6N2Q8NGY6 317 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 OR5AK2Q8NH90 309 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 ZNF519Q8TB69 540 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 OR14A2Q96R54 314 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 SPSB2Q99619 263 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 PDCD1LG2Q9BQ51 273 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 POTEKPQ9BYX7 375 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 RNF121Q9H920 327 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 MOV10Q9HCE1 1003 aaKnown RBP11.57□□□□□ -0.56
DDX56-204ENST00000431640 MYOTQ9UBF9 498 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 MALT1Q9UDY8 824 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 MRM2Q9UI43 246 aaKnown RBP11.57□□□□□ -0.56
DDX56-204ENST00000431640 SPATA2Q9UM82 520 aa11.57□□□□□ -0.56
DDX56-204ENST00000431640 IGLV3-32A0A0A0MS00 114 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 NPIPB13A6NJU9 1138 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 B4DXG7 233 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 NPIPB4C9JG80 1138 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 ETV2O00321 342 aaPredicted RBP11.56□□□□□ -0.56
DDX56-204ENST00000431640 DCTN6O00399 190 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 LYRM1O43325 122 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 SSX4O60224 188 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 RAF1P04049 648 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms