RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 C7orf50Q9BRJ6 194 aaKnown RBP11.78□□□□□ -0.52
PTCH1-207ENST00000429896 SYT4Q9H2B2 425 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 GALNT9Q9HCQ5 603 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 ITGB2P05107 769 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 FGFBP1Q14512 234 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 HNF4GQ14541 408 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 VASNQ6EMK4 673 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 MRPL21Q7Z2W9 205 aaKnown RBP11.78□□□□□ -0.52
PTCH1-207ENST00000429896 DPCDQ9BVM2 203 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-207ENST00000429896 FKRPQ9H9S5 495 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 B3GNT2Q9NY97 397 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 RASD1Q9Y272 281 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 ITGAMP11215 1152 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 LUMP51884 338 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-207ENST00000429896 TRAM1Q15629 374 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 BATFQ16520 125 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 ADPRMQ3LIE5 342 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 SLC29A1Q99808 456 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 FAM234AQ9H0X4 552 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 CD300AQ9UGN4 299 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 MYO10Q9HD67 2058 aa11.77□□□□□ -0.52
PTCH1-207ENST00000429896 M0R233 179 aa11.77□□□□□ -0.52
PTCH1-207ENST00000429896 PIP5K1CO60331 668 aa11.77□□□□□ -0.52
PTCH1-207ENST00000429896 GASTP01350 101 aa11.77□□□□□ -0.52
PTCH1-207ENST00000429896 FAM189A2Q15884 450 aa11.77□□□□□ -0.52
PTCH1-207ENST00000429896 SLC36A2Q495M3 483 aa11.77□□□□□ -0.52
PTCH1-207ENST00000429896 PLAG1Q6DJT9 500 aa11.77□□□□□ -0.52
PTCH1-207ENST00000429896 ZNF367Q7RTV3 350 aa11.77□□□□□ -0.52
PTCH1-207ENST00000429896 EGLN3Q9H6Z9 239 aa11.77□□□□□ -0.52
PTCH1-207ENST00000429896 CHST11Q9NPF2 352 aa11.77□□□□□ -0.52
PTCH1-207ENST00000429896 TBCCD1Q9NVR7 557 aa11.77□□□□□ -0.52
PTCH1-207ENST00000429896 GPR160Q9UJ42 338 aa11.77□□□□□ -0.52
PTCH1-207ENST00000429896 PMS2P1A4D2B8 440 aa11.77□□□□□ -0.52
PTCH1-207ENST00000429896 SLC22A20A6NK97 555 aa11.77□□□□□ -0.52
PTCH1-207ENST00000429896 NOTOA8MTQ0 251 aa11.77□□□□□ -0.52
PTCH1-207ENST00000429896 DLGAP1O14490 977 aa11.77□□□□□ -0.52
PTCH1-207ENST00000429896 TNFSF11O14788 317 aa11.77□□□□□ -0.52
PTCH1-207ENST00000429896 RAB4AP20338 218 aa11.77□□□□□ -0.52
PTCH1-207ENST00000429896 PTH2RP49190 550 aa11.77□□□□□ -0.52
PTCH1-207ENST00000429896 SLX4IPQ5VYV7 408 aa11.77□□□□□ -0.52
PTCH1-207ENST00000429896 B3GNTL1Q67FW5 361 aaPredicted RBP11.77□□□□□ -0.52
PTCH1-207ENST00000429896 MEX3BQ6ZN04 569 aaKnown RBP11.77□□□□□ -0.52
PTCH1-207ENST00000429896 Q8N402 240 aa11.77□□□□□ -0.52
PTCH1-207ENST00000429896 OR5L1Q8NGL2 311 aa11.77□□□□□ -0.52
PTCH1-207ENST00000429896 FAM46BQ96A09 425 aa11.77□□□□□ -0.52
PTCH1-207ENST00000429896 IGKV1-8A0A0C4DH67 115 aa11.77□□□□□ -0.53
PTCH1-207ENST00000429896 SLC1A7O00341 560 aa11.77□□□□□ -0.53
PTCH1-207ENST00000429896 LCKP06239 509 aa11.77□□□□□ -0.53
PTCH1-207ENST00000429896 GABRA2P47869 451 aa11.77□□□□□ -0.53
PTCH1-207ENST00000429896 OR1J2Q8NGS2 313 aa11.77□□□□□ -0.53
PTCH1-207ENST00000429896 TFAP2CQ92754 450 aa11.77□□□□□ -0.53
PTCH1-207ENST00000429896 TM4SF19Q96DZ7 209 aa11.77□□□□□ -0.53
PTCH1-207ENST00000429896 SLC25A18Q9H1K4 315 aa11.77□□□□□ -0.53
PTCH1-207ENST00000429896 SIDT1Q9NXL6 827 aaKnown RBP11.77□□□□□ -0.53
PTCH1-207ENST00000429896 GPR55Q9Y2T6 319 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-207ENST00000429896 RHBDD3Q9Y3P4 386 aa11.77□□□□□ -0.53
PTCH1-207ENST00000429896 TCRBV16S1A1N1A0A5B0 115 aa11.77□□□□□ -0.53
PTCH1-207ENST00000429896 FOXF1Q12946 379 aa11.77□□□□□ -0.53
PTCH1-207ENST00000429896 DPY19L2P2Q6ZN68 376 aa11.77□□□□□ -0.53
PTCH1-207ENST00000429896 IL1F10Q8WWZ1 152 aa11.77□□□□□ -0.53
PTCH1-207ENST00000429896 MOV10Q9HCE1 1003 aaKnown RBP11.77□□□□□ -0.53
PTCH1-207ENST00000429896 ATG2BQ96BY7 2078 aa11.77□□□□□ -0.53
PTCH1-207ENST00000429896 CXCL13O43927 109 aa11.77□□□□□ -0.53
PTCH1-207ENST00000429896 ZNF136P52737 540 aa11.77□□□□□ -0.53
PTCH1-207ENST00000429896 KEAP1Q14145 624 aa11.77□□□□□ -0.53
PTCH1-207ENST00000429896 SSX2Q16385 188 aa11.77□□□□□ -0.53
PTCH1-207ENST00000429896 DUSP7Q16829 419 aa11.77□□□□□ -0.53
PTCH1-207ENST00000429896 GLYR1Q49A26 553 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-207ENST00000429896 LILRB2Q8N423 598 aa11.77□□□□□ -0.53
PTCH1-207ENST00000429896 OR11G2Q8NGC1 345 aa11.77□□□□□ -0.53
PTCH1-207ENST00000429896 KCNIP1Q9NZI2 227 aa11.77□□□□□ -0.53
PTCH1-207ENST00000429896 MRPS18BQ9Y676 258 aaKnown RBP11.77□□□□□ -0.53
PTCH1-207ENST00000429896 GSTT2P0CG29 244 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 BMP4P12644 408 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-207ENST00000429896 RBM45Q8IUH3 476 aaKnown RBP11.76□□□□□ -0.53
PTCH1-207ENST00000429896 SERPINA12Q8IW75 414 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 OR2V1Q8NHB1 315 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 ZCCHC14Q8WYQ9 949 aaKnown RBP11.76□□□□□ -0.53
PTCH1-207ENST00000429896 FRMPD3Q5JV73 1810 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 A0A1W2PNR3 127 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 A6NIN4 97 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 RAB27BO00194 218 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 DBHP09172 617 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 CT62P0C5K7 136 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 PSMB10P40306 273 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 SSTP61278 116 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 TP53I3Q53FA7 332 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 PFN4Q8NHR9 129 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 TMEM163Q8TC26 289 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 GCDHQ92947 438 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-207ENST00000429896 ZNF764Q96H86 408 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-207ENST00000429896 MMP25Q9NPA2 562 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 ZFP64Q9NPA5 681 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 HIF1ANQ9NWT6 349 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 KCNE3Q9Y6H6 103 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 H3BUI4 141 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 H2AFB2P0C5Z0 115 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 FPR3P25089 353 aa11.76□□□□□ -0.53
PTCH1-207ENST00000429896 ACTR6Q9GZN1 396 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms