RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 ERMAPQ96PL5 475 aaPredicted RBP12.81□□□□□ -0.36
SGCE-204ENST00000428696 BDH2Q9BUT1 245 aa12.81□□□□□ -0.36
SGCE-204ENST00000428696 LINC00470Q9BZP3 86 aa12.81□□□□□ -0.36
SGCE-204ENST00000428696 DENND2DQ9H6A0 471 aaPredicted RBP12.81□□□□□ -0.36
SGCE-204ENST00000428696 EGLN3Q9H6Z9 239 aa12.81□□□□□ -0.36
SGCE-204ENST00000428696 ARMC1Q9NVT9 282 aa12.81□□□□□ -0.36
SGCE-204ENST00000428696 GLTPQ9NZD2 209 aa12.81□□□□□ -0.36
SGCE-204ENST00000428696 KIF17Q9P2E2 1029 aa12.81□□□□□ -0.36
SGCE-204ENST00000428696 MALT1Q9UDY8 824 aa12.81□□□□□ -0.36
SGCE-204ENST00000428696 MGAT4BQ9UQ53 548 aa12.81□□□□□ -0.36
SGCE-204ENST00000428696 FLNBO75369 2602 aaKnown RBP12.81□□□□□ -0.36
SGCE-204ENST00000428696 SOCS2O14508 198 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 XKRYO14609 159 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 ENTPD5O75356 428 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 SOX14O95416 240 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 CD14P08571 375 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 PPP3CBP16298 524 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 ZNF26P17031 533 aaPredicted RBP12.8□□□□□ -0.36
SGCE-204ENST00000428696 IGFBP2P18065 325 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 POU1F1P28069 291 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 SLC6A6P31641 620 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 CAPZA2P47755 286 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 GSSP48637 474 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 FHL1Q13642 323 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 GABRA6Q16445 453 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 RFX4Q33E94 735 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 HIKESHIQ53FT3 197 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 ARMC4Q5T2S8 1044 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 OR7E24Q6IFN5 339 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 KLHL24Q6TFL4 600 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 THSD4Q6ZMP0 1018 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 DPY19L2P2Q6ZN68 376 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 C22orf34Q6ZV56 151 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 HSD17B8Q92506 261 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 NSMAFQ92636 917 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 STMN2Q93045 179 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 ZNF570Q96NI8 536 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 TSPAN32Q96QS1 320 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 OR52D1Q9H346 318 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 TBC1D23Q9NUY8 699 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 KCNN3Q9UGI6 736 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 MAGED1Q9Y5V3 778 aaPredicted RBP12.8□□□□□ -0.36
SGCE-204ENST00000428696 CENPEQ02224 2701 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 HCFC1P51610 2035 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 FREM1Q5H8C1 2179 aa12.8□□□□□ -0.36
SGCE-204ENST00000428696 TEX13CA0A0J9YWL9 993 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 A6NIZ1 184 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 G3V2T6 193 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 H3BN98 237 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 H7C1C5 153 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 KLF4O43474 513 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 BAG2O95816 211 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 IGFBP1P08833 259 aaPredicted RBP12.79□□□□□ -0.36
SGCE-204ENST00000428696 TSPAN19P0C672 248 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 FCGR1AP12314 374 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 ZNF23P17027 643 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 COX5AP20674 150 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 RPS6KA3P51812 740 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 UBE2NP61088 152 aaKnown RBP12.79□□□□□ -0.36
SGCE-204ENST00000428696 RAP1BP61224 184 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 LCN6P62502 163 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 RAP1AP62834 184 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 TLE4Q04727 773 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 TAB1Q15750 504 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 ATP6AP1Q15904 470 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 SLC35F1Q5T1Q4 408 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 ZNF770Q6IQ21 691 aaPredicted RBP12.79□□□□□ -0.36
SGCE-204ENST00000428696 TMEM200AQ86VY9 491 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 CLDN22Q8N7P3 220 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 ARIH2OSQ8N7S6 290 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 LRRC75AQ8NAA5 344 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 ICA1LQ8NDH6 482 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 OR52L1Q8NGH7 329 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 HDAC2Q92769 488 aaKnown RBP12.79□□□□□ -0.36
SGCE-204ENST00000428696 RASD2Q96D21 266 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 LRR1Q96L50 414 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 RBP7Q96R05 134 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 NIPSNAP1Q9BPW8 284 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 STX18Q9P2W9 335 aaKnown RBP12.79□□□□□ -0.36
SGCE-204ENST00000428696 OR5H1A6NKK0 313 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 PGA4P0DJD7 388 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 PGA3P0DJD8 388 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 GSTM3P21266 225 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 CENPAP49450 140 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 ZNF83P51522 516 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 ZNF84P51523 738 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 TUBA1BP68363 451 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 TUBA4AP68366 448 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 PPA1Q15181 289 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 LRFN4Q6PJG9 635 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 TUBA1AQ71U36 451 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 ZDHHC13Q8IUH4 622 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 NOXO1Q8NFA2 376 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 OR1K1Q8NGR3 316 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 TMEM54Q969K7 222 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 MCHR2Q969V1 340 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 PIK3IP1Q96FE7 263 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 MUS81Q96NY9 551 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 USB1Q9BQ65 265 aaKnown RBP12.79□□□□□ -0.36
SGCE-204ENST00000428696 TSSK6Q9BXA6 273 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms