RNA–Protein interactions for RNA: ENST00000423879.5

AL359853.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL359853.3, Length 544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL359853.3-201ENST00000423879 CLPTM1O96005 669 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 IGKV3-15P01624 115 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 IGLV1-44P01699 117 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 IGHV2-5P01817 119 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 HLA-HP01893 362 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 CD1AP06126 327 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 CHRM4P08173 479 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 KRT16P08779 473 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 LINC00032P0C843 101 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 OR12D1P0DN82 309 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 LAMP1P11279 417 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 SDC1P18827 310 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 CBLP22681 906 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 NR4A1P22736 598 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 ATP5F1P24539 256 aaPredicted RBP4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 TACR3P29371 465 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 PGM1P36871 562 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 PTDSS1P48651 473 aaKnown RBP4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 GNG11P61952 73 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 SLC9A3R2Q15599 337 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 MAPK14Q16539 360 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 CEACAM16Q2WEN9 425 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 FAM153CQ494X1 144 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 GPAT3Q53EU6 434 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 CFAP157Q5JU67 520 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 PRAMEF8Q5VWM4 474 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 PRAMEF7Q5VXH5 474 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 CARD17Q5XLA6 110 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 REP15Q6BDI9 236 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 ZNF529Q6P280 563 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 TMEM154Q6P9G4 183 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 USP51Q70EK9 711 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 FAM90A1Q86YD7 464 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 GPR137CQ8N3F9 429 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 CADM2Q8N3J6 435 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 ARFGAP2Q8N6H7 521 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 ZIC4Q8N9L1 334 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 OR56A1Q8NGH5 318 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 XAGE5Q8WWM1 108 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 DVL3Q92997 716 aaPredicted RBP4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 TMEM45BQ96B21 275 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 SLC35G5Q96KT7 338 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 WWC2-AS2Q96NR7 200 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 TSPAN32Q96QS1 320 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 DCLRE1CQ96SD1 692 aaKnown RBP4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 PAFAH2Q99487 392 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 GPA33Q99795 319 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 NMUR2Q9GZQ4 415 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 GSTO2Q9H4Y5 243 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 MMP26Q9NRE1 261 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 ACSS1Q9NUB1 689 aaPredicted RBP4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 DECR2Q9NUI1 292 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 C1orf109Q9NX04 203 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 NINJ2Q9NZG7 142 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 CRNNQ9UBG3 495 aaPredicted RBP4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 OPN4Q9UHM6 478 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 OSGIN1Q9UJX0 560 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 PCDHGB4Q9UN71 923 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 TRAPPC4Q9Y296 219 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 STK38LQ9Y2H1 464 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 SAR1BQ9Y6B6 198 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 VWFP04275 2813 aa4.5□□□□□ -1.69
AL359853.3-201ENST00000423879 IGHV1-69-2A0A0G2JMI3 117 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 CLDN25C9JDP6 229 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 G3V4G9 280 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 H3BUI4 141 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 M0R3G1 203 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 F2RL2O00254 374 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 SLC28A1O00337 649 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 SCAMP2O15127 329 aaKnown RBP4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 ZSCAN12O43309 604 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 FRS3O43559 492 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 DNPH1O43598 174 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 RP2O75695 350 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 ZNF432O94892 652 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 CPSF4O95639 269 aaKnown RBP4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 LCKP06239 509 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 GPIP06744 558 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 IFI6P09912 130 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 CCL2P13500 99 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 RHCEP18577 417 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 CXCR1P25024 350 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 GTF2E2P29084 291 aaKnown RBP4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 GLRXP35754 106 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 ARR3P36575 388 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 HPCAL1P37235 193 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 FRKP42685 505 aaPredicted RBP4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 MAGEA12P43365 314 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 CLK1P49759 484 aaKnown RBP4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 SERPINB9P50453 376 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 ATP4BP51164 291 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 POLR2HP52434 150 aaKnown RBP4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 PRKAA2P54646 552 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 AQP5P55064 265 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 RAG2P55895 527 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 KRTAP10-3P60369 221 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 ERVS71-1P61550 626 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 RAB1AP62820 205 aa4.49□□□□□ -1.69
AL359853.3-201ENST00000423879 H3F3AP84243 136 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms