RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 SLC3A1Q07837 685 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 SELENBP1Q13228 472 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 EIF3IQ13347 325 aaKnown RBP8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 PCK2Q16822 640 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 ACSM3Q53FZ2 586 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 ZMAT1Q5H9K5 638 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 OR5M10Q6IEU7 315 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 C6orf15Q6UXA7 325 aaPredicted RBP8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 RPTNQ6XPR3 784 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 RAB11FIP2Q7L804 512 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 TIPARPQ7Z3E1 657 aaKnown RBP8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 FAM220AQ7Z4H9 259 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 SLC22A16Q86VW1 577 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 PLCZ1Q86YW0 608 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 PM20D2Q8IYS1 436 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 GHDCQ8N2G8 530 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 GTPBP8Q8N3Z3 284 aaPredicted RBP8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 GDPD1Q8N9F7 314 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 WDSUB1Q8N9V3 476 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 OTOSQ8NHW6 89 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 CT55Q8WUE5 264 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 ZBTB8AQ96BR9 441 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 NXPE2Q96DL1 559 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 MAP6Q96JE9 813 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 INTS14Q96SY0 518 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 KCNK17Q96T54 332 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 CDC6Q99741 560 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 B3GNT4Q9C0J1 378 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 SYT4Q9H2B2 425 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 PROK2Q9HC23 129 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 ABCB10Q9NRK6 738 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 PISDQ9UG56 409 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 MRM2Q9UI43 246 aaKnown RBP8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 GNG8Q9UK08 70 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 TCFL5Q9UL49 500 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 PADI1Q9ULC6 663 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 PCDHGA1Q9Y5H4 931 aa8.14□□□□□ -1.11
LINCMD1-201ENST00000418518 VCANP13611 3396 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 MED12Q93074 2177 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 hCG_2014768A0A024R1R8 64 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 CCDC187A0A096LP49 1063 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 TRBV2A0A0J9YWF9 115 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 TRBV5-5A0A0J9YX44 114 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 LOC102725191A0A1B0GVB3 256 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 FUOMA2VDF0 154 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 C2orf72A6NCS6 295 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 CENPBD1B2RD01 187 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 TERTO14746 1132 aaKnown RBP8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 RGS5O15539 181 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 SLC19A2O60779 497 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 SERPINI2O75830 405 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 ARL6IP5O75915 188 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 OR6A2O95222 327 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 TACSTD2P09758 323 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 PSKH1P11801 424 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 ICAM2P13598 275 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 CTLA4P16410 223 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 IL11P20809 199 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 APEX1P27695 318 aaKnown RBP8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 GTF2E2P29084 291 aaKnown RBP8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 CAV3P56539 151 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 ROM1Q03395 351 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 ALKBH1Q13686 389 aaKnown RBP8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 SSPNQ14714 243 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 OR7A5Q15622 319 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 YIF1BQ5BJH7 314 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 TEX30Q5JUR7 227 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 AGAP7PQ5VUJ5 663 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 SFXN4Q6P4A7 337 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 DNM1P34Q6PK57 102 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 CEACAM19Q7Z692 300 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 RPS19BP1Q86WX3 136 aaKnown RBP8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 ZNF454Q8N9F8 522 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 ZNF248Q8NDW4 579 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 OR4K17Q8NGC6 315 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 ASB17Q8WXJ9 295 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 RGP1Q92546 391 aaPredicted RBP8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 TMEM41AQ96HV5 264 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 TSPAN10Q9H1Z9 355 aaPredicted RBP8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 RERGLQ9H628 205 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 PPP1R3EQ9H7J1 279 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 PTGES2Q9H7Z7 377 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 SRA1Q9HD15 236 aaKnown RBP8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 SERINC1Q9NRX5 453 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 MRPL22Q9NWU5 206 aaKnown RBP8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 ETAA1Q9NY74 926 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 B3GAT1Q9P2W7 334 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 FBXL2Q9UKC9 423 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 ADAM30Q9UKF2 790 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 VDAC3Q9Y277 283 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 ZNF281Q9Y2X9 895 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 HDGFL3Q9Y3E1 203 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 R4GN57 208 aa8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 NCOA6Q14686 2063 aaPredicted RBP8.13□□□□□ -1.11
LINCMD1-201ENST00000418518 A0A1W2PNU3 283 aaPredicted RBP8.12□□□□□ -1.11
LINCMD1-201ENST00000418518 TVP23AA6NH52 213 aa8.12□□□□□ -1.11
LINCMD1-201ENST00000418518 OR4C45A6NMZ5 311 aa8.12□□□□□ -1.11
LINCMD1-201ENST00000418518 FAM171A2A8MVW0 826 aa8.12□□□□□ -1.11
LINCMD1-201ENST00000418518 C9orf172C9J069 976 aa8.12□□□□□ -1.11
LINCMD1-201ENST00000418518 NPIPA5E9PKD4 350 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms