RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 BBS1Q8NFJ9 593 aa7.14□□□□□ -1.27
MDC1-203ENST00000417033 OR2T33Q8NG76 320 aa7.14□□□□□ -1.27
MDC1-203ENST00000417033 OR52E2Q8NGJ4 325 aa7.14□□□□□ -1.27
MDC1-203ENST00000417033 HTRA1Q92743 480 aa7.14□□□□□ -1.27
MDC1-203ENST00000417033 NMD3Q96D46 503 aaKnown RBP7.14□□□□□ -1.27
MDC1-203ENST00000417033 GMPPAQ96IJ6 420 aaPredicted RBP7.14□□□□□ -1.27
MDC1-203ENST00000417033 FOXN4Q96NZ1 517 aa7.14□□□□□ -1.27
MDC1-203ENST00000417033 TSSK2Q96PF2 358 aa7.14□□□□□ -1.27
MDC1-203ENST00000417033 ALKBH3Q96Q83 286 aaPredicted RBP7.14□□□□□ -1.27
MDC1-203ENST00000417033 OR2M2Q96R28 347 aa7.14□□□□□ -1.27
MDC1-203ENST00000417033 NMNAT3Q96T66 252 aa7.14□□□□□ -1.27
MDC1-203ENST00000417033 ADI1Q9BV57 179 aa7.14□□□□□ -1.27
MDC1-203ENST00000417033 SF3B5Q9BWJ5 86 aaKnown RBP7.14□□□□□ -1.27
MDC1-203ENST00000417033 TXNIPQ9H3M7 391 aa7.14□□□□□ -1.27
MDC1-203ENST00000417033 TVP23BQ9NYZ1 205 aa7.14□□□□□ -1.27
MDC1-203ENST00000417033 Q9UFV3 132 aa7.14□□□□□ -1.27
MDC1-203ENST00000417033 NOSIPQ9Y314 301 aaKnown RBP7.14□□□□□ -1.27
MDC1-203ENST00000417033 NOX1Q9Y5S8 564 aa7.14□□□□□ -1.27
MDC1-203ENST00000417033 FREM1Q5H8C1 2179 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 MYO7BQ6PIF6 2116 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 OR6C68A6NDL8 312 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 EIF4E1BA6NMX2 242 aaKnown RBP7.13□□□□□ -1.27
MDC1-203ENST00000417033 ZNF724A8MTY0 619 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 FAM171A2A8MVW0 826 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 E9PLN8 166 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 ARPC3O15145 178 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 SURF4O15260 269 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 ARHGEF9O43307 516 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 SEC14L2O76054 403 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 VAMP5O95183 116 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 GPANK1O95872 356 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 YES1P07947 543 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 RNF224P0DH78 156 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 PGA4P0DJD7 388 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 PGA3P0DJD8 388 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 ACADSP16219 412 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 SDHAP31040 664 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 GRK5P34947 590 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 TIMP3P35625 211 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 GGT2P36268 569 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 CAPGP40121 348 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 RPS6KA3P51812 740 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 PER3P56645 1201 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 PSMA6P60900 246 aaKnown RBP7.13□□□□□ -1.27
MDC1-203ENST00000417033 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.13□□□□□ -1.27
MDC1-203ENST00000417033 RNPS1Q15287 305 aaKnown RBP7.13□□□□□ -1.27
MDC1-203ENST00000417033 ETFDHQ16134 617 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 ANKDD1AQ495B1 522 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 RIPPLY2Q5TAB7 128 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 TSPO2Q5TGU0 170 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 C9orf135Q5VTT2 229 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 RPL13AP3Q6NVV1 102 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 SLC27A4Q6P1M0 643 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 LEG1Q6P5S2 330 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 LYPD4Q6UWN0 246 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 TFAP2EQ6VUC0 442 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 DHRSXQ8N5I4 330 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 RELL2Q8NC24 303 aaPredicted RBP7.13□□□□□ -1.27
MDC1-203ENST00000417033 NPEPL1Q8NDH3 523 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 OR9Q1Q8NGQ5 310 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 OR6X1Q8NH79 312 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 FAM81AQ8TBF8 368 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 ZNRF4Q8WWF5 429 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 TMEM45BQ96B21 275 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 STARD4Q96DR4 205 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 ZNF837Q96EG3 531 aaPredicted RBP7.13□□□□□ -1.27
MDC1-203ENST00000417033 CCDC120Q96HB5 630 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 HRASLS5Q96KN8 279 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 IL4I1Q96RQ9 567 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 DDOQ99489 341 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 TM9SF2Q99805 663 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 VKORC1Q9BQB6 163 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 OPN3Q9H1Y3 402 aaPredicted RBP7.13□□□□□ -1.27
MDC1-203ENST00000417033 HINT3Q9NQE9 182 aaKnown RBP7.13□□□□□ -1.27
MDC1-203ENST00000417033 SLC7A10Q9NS82 523 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 ZNF226Q9NYT6 803 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 GRHPRQ9UBQ7 328 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 NDRG4Q9ULP0 352 aaKnown RBP7.13□□□□□ -1.27
MDC1-203ENST00000417033 RNF6Q9Y252 685 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 PCDHGB5Q9Y5G0 923 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 ORC6Q9Y5N6 252 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 GMPPBQ9Y5P6 360 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 ARHGAP21Q5T5U3 1957 aa7.13□□□□□ -1.27
MDC1-203ENST00000417033 SPENQ96T58 3664 aaKnown RBP7.13□□□□□ -1.27
MDC1-203ENST00000417033 RP1L1Q8IWN7 2480 aaPredicted RBP7.12□□□□□ -1.27
MDC1-203ENST00000417033 INTS1Q8N201 2190 aaKnown RBP7.12□□□□□ -1.27
MDC1-203ENST00000417033 GCN1Q92616 2671 aaKnown RBP7.12□□□□□ -1.27
MDC1-203ENST00000417033 LOC100130705A0A1B0GUX0 176 aa7.12□□□□□ -1.27
MDC1-203ENST00000417033 SLC22A23A1A5C7 686 aa7.12□□□□□ -1.27
MDC1-203ENST00000417033 NPIPB13A6NJU9 1138 aa7.12□□□□□ -1.27
MDC1-203ENST00000417033 NPIPB4C9JG80 1138 aa7.12□□□□□ -1.27
MDC1-203ENST00000417033 M0R3G1 203 aa7.12□□□□□ -1.27
MDC1-203ENST00000417033 GPR171O14626 319 aa7.12□□□□□ -1.27
MDC1-203ENST00000417033 LRRTM2O43300 516 aa7.12□□□□□ -1.27
MDC1-203ENST00000417033 SMNDC1O75940 238 aaKnown RBP eCLIP7.12□□□□□ -1.27
MDC1-203ENST00000417033 CGAP01215 116 aa7.12□□□□□ -1.27
MDC1-203ENST00000417033 GYPBP06028 91 aa7.12□□□□□ -1.27
MDC1-203ENST00000417033 PSKH1P11801 424 aa7.12□□□□□ -1.27
MDC1-203ENST00000417033 APEHP13798 732 aaKnown RBP7.12□□□□□ -1.27
MDC1-203ENST00000417033 CTLA4P16410 223 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms