RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 BRSK1Q8TDC3 778 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 BLOC1S5Q8TDH9 187 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 SRSF12Q8WXF0 261 aaKnown RBP2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 ST8SIA1Q92185 356 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 ANP32BQ92688 251 aaKnown RBP2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 UCN3Q969E3 161 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 PELI1Q96FA3 418 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 PANX2Q96RD6 677 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 NRIP2Q9BQI9 281 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 CHRDL1Q9BU40 450 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 POLR2J2Q9GZM3 115 aaKnown RBP2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 POLR2J3Q9H1A7 115 aaKnown RBP2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 PSTPIP2Q9H939 334 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 SLC38A10Q9HBR0 1119 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 SLC17A5Q9NRA2 495 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 IL36GQ9NZH8 169 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 EPS15L1Q9UBC2 864 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 PCSK1NQ9UHG2 260 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 TFR2Q9UP52 801 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 ASF1AQ9Y294 204 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 PTPRSQ13332 1948 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 GREB1Q4ZG55 1949 aa2.44□□□□□ -2.02
HMGB1P11-201ENST00000413899 ADGRA3Q8IWK6 1321 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 ATG2AQ2TAZ0 1938 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 SCN1AP35498 2009 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 IGHV1OR21-1A0A087WYE8 117 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 DYNC1I1O14576 645 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 XPO1O14980 1071 aaKnown RBP2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 STX10O60499 249 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 CA11O75493 328 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 LYPLA2O95372 231 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 LCA5LO95447 670 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 PRB2P02812 416 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 COX5AP20674 150 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 IMPDH1P20839 514 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 MAP3K8P41279 467 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 EPS15P42566 896 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 KIR2DS4P43632 304 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 CASP4P49662 377 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 RGS4P49798 205 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 UCNP55089 124 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 LRRC63Q05C16 580 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 SPAG1Q07617 926 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 ARFRP1Q13795 201 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 VGLL4Q14135 290 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 SYCP1Q15431 976 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 GPRC6AQ5T6X5 926 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 TTC23Q5W5X9 447 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 NIPA1Q7RTP0 329 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 PRSS41Q7RTY9 318 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 ZNF683Q8IZ20 524 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 OR2L13Q8N349 312 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 CSGALNACT2Q8N6G5 542 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 ZNF433Q8N7K0 673 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 CCDC112Q8NEF3 446 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 OR10G3Q8NGC4 313 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 OR4D5Q8NGN0 318 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 OR2T34Q8NGX1 318 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 HTR3CQ8WXA8 447 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 FAM104AQ969W3 186 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 SENP8Q96LD8 212 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 TAAR1Q96RJ0 339 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 CHP1Q99653 195 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 EDEM2Q9BV94 578 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 SUDS3Q9H7L9 328 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 SLC25A22Q9H936 323 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 XPNPEP1Q9NQW7 623 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 ZNF331Q9NQX6 463 aaPredicted RBP2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 RMND1Q9NWS8 449 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 TREM2Q9NZC2 230 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 TMOD2Q9NZR1 351 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 PRO0461Q9UI25 63 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 ZNF225Q9UK10 706 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 RPH3ALQ9UNE2 315 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 NEU3Q9UQ49 428 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 TRAF3IP3Q9Y228 551 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 AP1M2Q9Y6Q5 423 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 COL4A6Q14031 1691 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 OBSL1O75147 1896 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 PLXNA3P51805 1871 aa2.43□□□□□ -2.02
HMGB1P11-201ENST00000413899 LTBP2Q14767 1821 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 PLXNA4Q9HCM2 1894 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 IGKV1D-8A0A087WSZ0 117 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 A0A1B0GUS0 222 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 DCTN6O00399 190 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 RTL8CO15255 209 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 INSP01308 110 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 IQCF3P0C7M6 154 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 POLR2MP0CAP2 368 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 PNMA6AP0CW24 399 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 PNMTP11086 282 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 ATP6V1C1P21283 382 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 ANXA13P27216 316 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 HLCSP50747 726 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 TPM4P67936 248 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 CBX1P83916 185 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 C1orf61Q13536 156 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 GANABQ14697 944 aaKnown RBP2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 CEP55Q53EZ4 464 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 C1orf100Q5SVJ3 147 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms