RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 DEF8Q6ZN54 512 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 ADIPOR2Q86V24 386 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 SLC30A8Q8IWU4 369 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 BOD1L2Q8IYS8 172 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 C1orf87Q8N0U7 546 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 C5orf30Q96GV9 206 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 S100A13Q99584 98 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 ATF6BQ99941 703 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 SYT17Q9BSW7 474 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 SNRNP25Q9BV90 132 aaKnown RBP4.78□□□□□ -1.64
HERC4-205ENST00000412272 WDR13Q9H1Z4 485 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 DPAGT1Q9H3H5 408 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 ATXN3LQ9H3M9 355 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 ADGRL4Q9HBW9 690 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 CBLCQ9ULV8 474 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 FLVCR2Q9UPI3 526 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 EXOGQ9Y2C4 368 aaKnown RBP4.78□□□□□ -1.64
HERC4-205ENST00000412272 AMDHD2Q9Y303 409 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 SF3B6Q9Y3B4 125 aaKnown RBP4.78□□□□□ -1.64
HERC4-205ENST00000412272 TMED3Q9Y3Q3 217 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 SMIM30A4D0T7 59 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 FARS2O95363 451 aaKnown RBP4.78□□□□□ -1.64
HERC4-205ENST00000412272 ELFN1P0C7U0 828 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 CD79AP11912 226 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 HGFP14210 728 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 MGMTP16455 207 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 RBMS1P29558 406 aaKnown RBP4.78□□□□□ -1.64
HERC4-205ENST00000412272 BCL6P41182 706 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 VIPR2P41587 438 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 RPL34P49207 117 aaKnown RBP4.78□□□□□ -1.64
HERC4-205ENST00000412272 RAB9AP51151 201 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 SESN2P58004 480 aaPredicted RBP4.78□□□□□ -1.64
HERC4-205ENST00000412272 CRADDP78560 199 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 ELAVL1Q15717 326 aaKnown RBP4.78□□□□□ -1.64
HERC4-205ENST00000412272 NKPD1Q17RQ9 610 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 ZNF648Q5T619 568 aaPredicted RBP4.78□□□□□ -1.64
HERC4-205ENST00000412272 OR10K2Q6IF99 312 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 OVCH1Q7RTY7 1134 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 ZDHHC21Q8IVQ6 265 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 TTC9BQ8N6N2 239 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 ARL14EPQ8N8R7 260 aaPredicted RBP4.78□□□□□ -1.64
HERC4-205ENST00000412272 OR5B17Q8NGF7 314 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 OR4D6Q8NGJ1 314 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 GLMPQ8WWB7 406 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 NKX3-1Q99801 234 aaPredicted RBP4.78□□□□□ -1.64
HERC4-205ENST00000412272 SLC6A7Q99884 636 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 CRISPLD1Q9H336 500 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 SLAMF8Q9P0V8 285 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 PEF1Q9UBV8 284 aaKnown RBP4.78□□□□□ -1.64
HERC4-205ENST00000412272 LIMD1Q9UGP4 676 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 PITPNC1Q9UKF7 332 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 ANGPT4Q9Y264 503 aa4.78□□□□□ -1.64
HERC4-205ENST00000412272 TRBV7-9A0A0J9YWB2 115 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 OR52A4PA6NMU1 304 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 G3V3G9 751 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 CASKO14936 926 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 FBXO24O75426 580 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 EBLN1P0CF75 366 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 GAS1P54826 345 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 TSTA3Q13630 321 aaPredicted RBP4.77□□□□□ -1.65
HERC4-205ENST00000412272 IL18Q14116 193 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 PLK5Q496M5 336 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 ELFN2Q5R3F8 820 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 SUSD4Q5VX71 490 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 MRGPRGQ86SM5 289 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 EXD3Q8N9H8 876 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 HHIPL1Q96JK4 782 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 NICN1Q9BSH3 213 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 PHF7Q9BWX1 381 aaPredicted RBP4.77□□□□□ -1.65
HERC4-205ENST00000412272 DPH1Q9BZG8 443 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 GBA2Q9HCG7 927 aaPredicted RBP4.77□□□□□ -1.65
HERC4-205ENST00000412272 RPS10P5Q9NQ39 176 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 MEPEQ9NQ76 525 aaPredicted RBP4.77□□□□□ -1.65
HERC4-205ENST00000412272 CISHQ9NSE2 258 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 MRPS18AQ9NVS2 196 aaKnown RBP4.77□□□□□ -1.65
HERC4-205ENST00000412272 DDIT4Q9NX09 232 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 P4HTMQ9NXG6 502 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 RHCGQ9UBD6 479 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 HSPB7Q9UBY9 170 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 PPP1R3CQ9UQK1 317 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.77□□□□□ -1.65
HERC4-205ENST00000412272 YJEFN3A6XGL0 299 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 TLR4O00206 839 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 BHLHE40O14503 412 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 CDIPTO14735 213 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 GSTZ1O43708 216 aaPredicted RBP4.77□□□□□ -1.65
HERC4-205ENST00000412272 CSO75390 466 aaKnown RBP4.77□□□□□ -1.65
HERC4-205ENST00000412272 WNT11O96014 354 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 GCGP01275 180 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 CTSBP07858 339 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 ALPPL2P10696 532 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 CXCR1P25024 350 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 IL12BP29460 328 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 CNR2P34972 360 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 ERVFRD-1P60508 538 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 UFM1P61960 85 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 PPP1R8Q12972 351 aaKnown RBP4.77□□□□□ -1.65
HERC4-205ENST00000412272 RAB11BQ15907 218 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 DECR1Q16698 335 aa4.77□□□□□ -1.65
HERC4-205ENST00000412272 ZNF750Q32MQ0 723 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms