RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 INHBCP55103 352 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 MAT1AQ00266 395 aaKnown RBP11.16□□□□□ -0.62
SMCR8-201ENST00000406438 CTBSQ01459 385 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 TREX1Q9NSU2 369 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 EDN1P05305 212 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 EMX1Q04741 257 aaPredicted RBP11.16□□□□□ -0.62
SMCR8-201ENST00000406438 ZNF687Q8N1G0 1237 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 FAM122AQ96E09 287 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 SORT1Q99523 831 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 RCE1Q9Y256 329 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 PMP2P02689 132 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 CSN1S1P47710 185 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 CYB561P49447 251 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 FABP6P51161 128 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 GABREP78334 506 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 C9orf152Q5JTZ5 239 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 TANGO2Q6ICL3 276 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 GJC3Q8NFK1 279 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 MRPS28Q9Y2Q9 187 aaKnown RBP11.15□□□□□ -0.62
SMCR8-201ENST00000406438 TMEM217Q8N7C4 229 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 DNAJC5GQ8N7S2 189 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 ZNF775Q96BV0 537 aaPredicted RBP11.15□□□□□ -0.62
SMCR8-201ENST00000406438 GALNT9Q9HCQ5 603 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 TRAV36DV7A0A075B6V5 113 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 GASTP01350 101 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 GPLD1P80108 840 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 MFAP5Q13361 173 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 GTDC1Q4AE62 458 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 DPY19L2P2Q6ZN68 376 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 ESPNLQ6ZVH7 1005 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 LINC00696Q6ZRV3 163 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 TMEFF1Q8IYR6 380 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 KIRREL1Q96J84 757 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 FANCMQ8IYD8 2048 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 SERINC4A6NH21 518 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 SH2D7A6NKC9 451 aaPredicted RBP11.15□□□□□ -0.62
SMCR8-201ENST00000406438 GRPP07492 148 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 SELEP16581 610 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 TCN2P20062 427 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 JAG1P78504 1218 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 Q6ZRG5 221 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 H2BFWTQ7Z2G1 175 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 LIPHQ8WWY8 451 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 TMEM43Q9BTV4 400 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 C12orf49Q9H741 205 aa11.15□□□□□ -0.62
SMCR8-201ENST00000406438 A0A0B4J2A0 478 aa11.15□□□□□ -0.63
SMCR8-201ENST00000406438 LOC100289279A0A1B0GTE1 492 aa11.15□□□□□ -0.63
SMCR8-201ENST00000406438 CACNG3O60359 315 aa11.15□□□□□ -0.63
SMCR8-201ENST00000406438 NAGAP17050 411 aa11.15□□□□□ -0.63
SMCR8-201ENST00000406438 FKBP2P26885 142 aaKnown RBP11.15□□□□□ -0.63
SMCR8-201ENST00000406438 SSTR2P30874 369 aa11.15□□□□□ -0.63
SMCR8-201ENST00000406438 TBCEQ15813 527 aaPredicted RBP11.15□□□□□ -0.63
SMCR8-201ENST00000406438 ZNF789Q5FWF6 425 aa11.15□□□□□ -0.63
SMCR8-201ENST00000406438 MED25Q71SY5 747 aa11.15□□□□□ -0.63
SMCR8-201ENST00000406438 SLC39A11Q8N1S5 342 aa11.15□□□□□ -0.63
SMCR8-201ENST00000406438 FBXW5Q969U6 566 aa11.15□□□□□ -0.63
SMCR8-201ENST00000406438 SLC46A2Q9BY10 475 aa11.15□□□□□ -0.63
SMCR8-201ENST00000406438 METTL17Q9H7H0 456 aaPredicted RBP11.15□□□□□ -0.63
SMCR8-201ENST00000406438 SHPKQ9UHJ6 478 aa11.15□□□□□ -0.63
SMCR8-201ENST00000406438 POM121CA8CG34 1229 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 TP53INP2Q8IXH6 220 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 KDF1Q8NAX2 398 aaPredicted RBP11.14□□□□□ -0.63
SMCR8-201ENST00000406438 RLN3Q8WXF3 142 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 PLXNA1Q9UIW2 1896 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 TLCD2A6NGC4 264 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 SRMP19623 302 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 HOXD9P28356 352 aaPredicted RBP11.14□□□□□ -0.63
SMCR8-201ENST00000406438 C21orf33P30042 268 aaPredicted RBP11.14□□□□□ -0.63
SMCR8-201ENST00000406438 HLA-FP30511 346 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 ZNF718Q3SXZ3 478 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 CBLL1Q75N03 491 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 KLHDC8BQ8IXV7 354 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 KDM8Q8N371 416 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 NOX4Q9NPH5 578 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 DOCK9Q9BZ29 2069 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 IGKV6D-21A0A0A0MT36 114 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 ARHGAP33O14559 1287 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 GABRB3P28472 473 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 LAP3P28838 519 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 ADRA1AP35348 466 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 FAM78AQ5JUQ0 283 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 C1orf220Q5T0J3 134 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 SCD5Q86SK9 330 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 ZBED3Q96IU2 234 aaPredicted RBP11.14□□□□□ -0.63
SMCR8-201ENST00000406438 FCRL1Q96LA6 429 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 ARNTLO00327 626 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 SLC16A6O15403 523 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 OR8G1Q15617 311 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 RTL8BQ17RB0 113 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 DPPA2Q7Z7J5 298 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 CLEC14AQ86T13 490 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 LINC01599Q8WXQ3 324 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 HDAC8Q9BY41 377 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 HEYLQ9NQ87 328 aaPredicted RBP11.14□□□□□ -0.63
SMCR8-201ENST00000406438 RAB22AQ9UL26 194 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 PADI1Q9ULC6 663 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 IGKV6-21A0A0C4DH24 114 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 ADGRG3Q86Y34 549 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 ZFP90Q8TF47 636 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms