RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 GKN2Q86XP6 184 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 CCDC28AQ8IWP9 274 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 PM20D2Q8IYS1 436 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 LRRC29Q8WV35 223 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 ELSPBP1Q96BH3 223 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 ELOVL3Q9HB03 270 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 DUSP22Q9NRW4 184 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 DNAJB12Q9NXW2 375 aaKnown RBP4.51□□□□□ -1.69
SMAD4-202ENST00000398417 RDH8Q9NYR8 311 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 COPS7AQ9UBW8 275 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 CEP250Q9BV73 2442 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 CACNA1GO43497 2377 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 DCDC2BA2VCK2 349 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 M0QYG6 137 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 BHLHE40O14503 412 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 LYPD3O95274 346 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 TFP02787 698 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF35P13682 527 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 LRFN4Q6PJG9 635 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 APOOLQ6UXV4 268 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 TMPRSS11FQ6ZWK6 438 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 MED25Q71SY5 747 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF767PQ75MW2 155 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 KCTD9Q7L273 389 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 PXKQ7Z7A4 578 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 PILRAQ9UKJ1 303 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 FOXJ3Q9UPW0 622 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 A0A0B4J293 547 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 A0A0B4J2E0 115 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 A0A1B0GX12 115 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 NKX2-2O95096 273 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 FAUP35544 74 aaKnown RBP4.51□□□□□ -1.69
SMAD4-202ENST00000398417 GAS1P54826 345 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 BTG1P62324 171 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 LTBQ06643 244 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 LIPNQ5VXI9 398 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF248Q8NDW4 579 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 TOR1AIP2Q8NFQ8 470 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 OR52B4Q8NGK2 314 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 SLC37A2Q8TED4 501 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 CREB3L1Q96BA8 519 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 NUDT22Q9BRQ3 303 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 PDE7BQ9NP56 450 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 MED12LQ86YW9 2145 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 EEF1E1-BLOC1S5C9J1V9 151 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 SLC25A17O43808 307 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 CFL1P23528 166 aaKnown RBP4.51□□□□□ -1.69
SMAD4-202ENST00000398417 SELENOPP49908 381 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 AP3S2P59780 193 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 KLHL26Q53HC5 615 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 GLT8D1Q68CQ7 371 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 LIN54Q6MZP7 749 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 ZCCHC12Q6PEW1 402 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 LYPD8Q6UX82 237 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 MDGA2Q7Z553 956 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF687Q8N1G0 1237 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 OR7G1Q8NGA0 311 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.51□□□□□ -1.69
SMAD4-202ENST00000398417 ZNF764Q96H86 408 aaPredicted RBP4.51□□□□□ -1.69
SMAD4-202ENST00000398417 DERL3Q96Q80 235 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 UBQLN2Q9UHD9 624 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 CA14Q9ULX7 337 aa4.51□□□□□ -1.69
SMAD4-202ENST00000398417 OR5K4A6NMS3 321 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 PRAMEF26H0Y7S4 382 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 HCRTR1O43613 425 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 UTS2O95399 124 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 MMP7P09237 267 aaPredicted RBP4.5□□□□□ -1.69
SMAD4-202ENST00000398417 NID1P14543 1247 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 FBLP22087 321 aaKnown RBP4.5□□□□□ -1.69
SMAD4-202ENST00000398417 PTBP1P26599 531 aaKnown RBP eCLIP4.5□□□□□ -1.693e-11■■■■□ 21.8
SMAD4-202ENST00000398417 KIR2DL1P43626 348 aaPredicted RBP4.5□□□□□ -1.69
SMAD4-202ENST00000398417 FNTBP49356 437 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 FOXL2P58012 376 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 ACTA2P62736 377 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 ACTG2P63267 376 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 FAM53BQ14153 422 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 RAB30Q15771 203 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 C4orf17Q53FE4 359 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 BAIAP2L2Q6UXY1 529 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 Q6ZTK2 550 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 KDM8Q8N371 416 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 DUSP18Q8NEJ0 188 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 OR2AJ1Q8NGZ0 328 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 OR2M2Q96R28 347 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 ADOQ96SZ5 270 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 FKRPQ9H9S5 495 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 CALHM2Q9HA72 323 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 LYRM4Q9HD34 91 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 PAPPA2Q9BXP8 1791 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 TMED7-TICAM2A0A0A6YYA0 188 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.5□□□□□ -1.69
SMAD4-202ENST00000398417 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.5□□□□□ -1.69
SMAD4-202ENST00000398417 EPOPA6NHQ4 379 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 TNFRSF10AO00220 468 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 GMDSO60547 372 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 ADAM11O75078 769 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 GLCEO94923 617 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 OR2T7P0C7T2 308 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 LINC00271P0C7V0 271 aa4.5□□□□□ -1.69
SMAD4-202ENST00000398417 PF4V1P10720 104 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms