RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 DECR2Q9NUI1 292 aa14.38□□□□□ -0.11
GNE-202ENST00000396594 LRFN1Q9P244 771 aa14.38□□□□□ -0.11
GNE-202ENST00000396594 TMEM82A0PJX8 343 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 AGBL4Q5VU57 503 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 ENTHD1Q8IYW4 607 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 DRAXINQ8NBI3 349 aaPredicted RBP14.37□□□□□ -0.11
GNE-202ENST00000396594 SEMA6DQ8NFY4 1073 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 C19orf12Q9NSK7 152 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 SPTY2D1-AS1A0A0U1RR47 76 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 PTNP21246 168 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 DRD5P21918 477 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 GABRR1P24046 479 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 CD82P27701 267 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 HOXC8P31273 242 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 GALNSP34059 522 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 PPT1P50897 306 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 SUB1P53999 127 aaKnown RBP eCLIP14.37□□□□□ -0.11
GNE-202ENST00000396594 LRRC37A5PQ49AS3 106 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 SLC22A6Q4U2R8 563 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 BRICD5Q6PL45 260 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 CDCP1Q9H5V8 836 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 RBFOX1Q9NWB1 397 aaKnown RBP14.37□□□□□ -0.11
GNE-202ENST00000396594 LAMP3Q9UQV4 416 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 OR1D5P58170 312 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 ARF1P84077 181 aaKnown RBP14.37□□□□□ -0.11
GNE-202ENST00000396594 P2RY14Q15391 338 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 DLEU7Q6UYE1 221 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 EMC7Q9NPA0 242 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 ANKUB1A6NFN9 424 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 SOD1P00441 154 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 NME1P15531 152 aaKnown RBP14.37□□□□□ -0.11
GNE-202ENST00000396594 ZNF14P17017 642 aaPredicted RBP14.37□□□□□ -0.11
GNE-202ENST00000396594 GALP22466 123 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 ARRB2P32121 409 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 TNFSF8P32971 234 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 CAV3P56539 151 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 MAT1AQ00266 395 aaKnown RBP14.37□□□□□ -0.11
GNE-202ENST00000396594 LILRA6Q6PI73 481 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 FAM109AQ8N4B1 249 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 BCORP1Q8N888 145 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 HMGCLL1Q8TB92 370 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 FCRL1Q96LA6 429 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 TCEAL7Q9BRU2 100 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 ABHD6Q9BV23 337 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 AMBRA1Q9C0C7 1298 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 CRISPLD2Q9H0B8 497 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 UCK1Q9HA47 277 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 MBNL1Q9NR56 388 aaKnown RBP14.37□□□□□ -0.11
GNE-202ENST00000396594 ZNF226Q9NYT6 803 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 TBC1D29Q9UFV1 150 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 TRAPPC2LQ9UL33 140 aa14.37□□□□□ -0.11
GNE-202ENST00000396594 A0A1W2PPV4 95 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 MKRN2OSH3BPM6 223 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 GABARAPH6UMI1 98 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 KNG1P01042 644 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 FUT4P22083 530 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 PGGT1BP53609 377 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 TLE4Q04727 773 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 NCCRP1Q6ZVX7 275 aaPredicted RBP14.36□□□□□ -0.11
GNE-202ENST00000396594 LINC01599Q8WXQ3 324 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 A6NL46 340 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 I6L893 689 aaPredicted RBP14.36□□□□□ -0.11
GNE-202ENST00000396594 MSTNO14793 375 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 SERPINA2P20848 420 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 FXYD4P59646 89 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 PRAMEF9Q5VWM5 478 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 OR51L1Q8NGJ5 315 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 OR52I1Q8NGK6 324 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 WFDC5Q8TCV5 224 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 DCBLD2Q96PD2 775 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 ZNF346Q9UL40 294 aaKnown RBP14.36□□□□□ -0.11
GNE-202ENST00000396594 LSM5Q9Y4Y9 91 aaKnown RBP14.36□□□□□ -0.11
GNE-202ENST00000396594 KCNE1BA0A087WTH5 132 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 F6UZH7 168 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 PPP6CO00743 305 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 ARHGAP33O14559 1287 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 SGCEO43556 437 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 PPP3CBP16298 524 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 Q6ZTK2 550 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 NANOGP1Q8N7R0 232 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 AP1S3Q96PC3 154 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 FAM212BQ9NTI7 297 aaPredicted RBP14.36□□□□□ -0.11
GNE-202ENST00000396594 HCSTQ9UBK5 93 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 ATXN7L1Q9ULK2 861 aaPredicted RBP14.36□□□□□ -0.11
GNE-202ENST00000396594 SMIM30A4D0T7 59 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 TRABD2BA6NFA1 517 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 CBR3O75828 277 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 DBHP09172 617 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 CT45A6P0DMU7 189 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 CT45A5P0DMU8 189 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 CT45A7P0DMV0 189 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 CT45A8P0DMV1 189 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 CT45A9P0DMV2 189 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 PSMB10P40306 273 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 CT45A2Q5DJT8 189 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 CT45A1Q5HYN5 189 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 KCNIP4Q6PIL6 250 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 LGI3Q8N145 548 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 LFNGQ8NES3 379 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 CT45A3Q8NHU0 189 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms