RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 UCHL1P09936 223 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 ALOX5APP20292 161 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 CCKBRP32239 447 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 SOX2P48431 317 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 FAM198BQ6UWH4 519 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 UTS2BQ765I0 119 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 MDGA2Q7Z553 956 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 MISPQ8IVT2 679 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 OR10AC1Q8NH08 325 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 POC1BQ8TC44 478 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 STK35Q8TDR2 534 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 INTS14Q96SY0 518 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 GFI1Q99684 422 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 MRPL22Q9NWU5 206 aaKnown RBP13.56□□□□□ -0.24
GPC3-202ENST00000394299 B3GALT1Q9Y5Z6 326 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 CNTRLQ7Z7A1 2325 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 CPAMD8Q8IZJ3 1885 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 EML6Q6ZMW3 1958 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 RALGAPA1Q6GYQ0 2036 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.56□□□□□ -0.24
GPC3-202ENST00000394299 RAD1O60671 282 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 ITGA10O75578 1167 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 WNT11O96014 354 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 CASP3P42574 277 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 EIF2B2P49770 351 aaKnown RBP13.56□□□□□ -0.24
GPC3-202ENST00000394299 DUSP3P51452 185 aaPredicted RBP13.56□□□□□ -0.24
GPC3-202ENST00000394299 FMODQ06828 376 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 SELENBP1Q13228 472 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 CCDC58Q4VC31 144 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 LRRN1Q6UXK5 716 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 TPRA1Q86W33 373 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 ELP5Q8TE02 316 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 RHBDD1Q8TEB9 315 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 DERL3Q96Q80 235 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 ANKRD10Q9NXR5 420 aa13.56□□□□□ -0.24
GPC3-202ENST00000394299 C19orf25Q9UFG5 118 aaPredicted RBP13.56□□□□□ -0.24
GPC3-202ENST00000394299 IGKV1D-43A0A0B4J1Z2 117 aa13.55□□□□□ -0.24
GPC3-202ENST00000394299 SLC22A23A1A5C7 686 aa13.55□□□□□ -0.24
GPC3-202ENST00000394299 EPXP11678 715 aa13.55□□□□□ -0.24
GPC3-202ENST00000394299 IFNGR1P15260 489 aa13.55□□□□□ -0.24
GPC3-202ENST00000394299 RPS18P62269 152 aaKnown RBP13.55□□□□□ -0.24
GPC3-202ENST00000394299 HSF2Q03933 536 aa13.55□□□□□ -0.24
GPC3-202ENST00000394299 HSD17B12Q53GQ0 312 aa13.55□□□□□ -0.24
GPC3-202ENST00000394299 UNQ9370/PRO34162Q6UXP9 181 aa13.55□□□□□ -0.24
GPC3-202ENST00000394299 TEX19Q8NA77 164 aa13.55□□□□□ -0.24
GPC3-202ENST00000394299 OR51A4Q8NGJ6 313 aa13.55□□□□□ -0.24
GPC3-202ENST00000394299 OR8K3Q8NH51 312 aa13.55□□□□□ -0.24
GPC3-202ENST00000394299 ST8SIA1Q92185 356 aa13.55□□□□□ -0.24
GPC3-202ENST00000394299 NXPE2Q96DL1 559 aa13.55□□□□□ -0.24
GPC3-202ENST00000394299 EMC6Q9BV81 110 aa13.55□□□□□ -0.24
GPC3-202ENST00000394299 SLC39A1Q9NY26 324 aa13.55□□□□□ -0.24
GPC3-202ENST00000394299 COA3Q9Y2R0 106 aaPredicted RBP13.55□□□□□ -0.24
GPC3-202ENST00000394299 ZNF281Q9Y2X9 895 aa13.55□□□□□ -0.24
GPC3-202ENST00000394299 HS3ST3B1Q9Y662 390 aa13.55□□□□□ -0.24
GPC3-202ENST00000394299 A0A1W2PNR3 127 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 G3V3Y1 287 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 OR2T1O43869 369 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 LDOC1O95751 146 aaPredicted RBP13.54□□□□□ -0.24
GPC3-202ENST00000394299 SERPINA3P01011 423 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 SYPP08247 313 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 FREM3P0C091 2139 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 SRMP19623 302 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 KIR2DL3P43628 341 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 MC2RQ01718 297 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 STPG1Q5TH74 334 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 ZNF433Q8N7K0 673 aaPredicted RBP13.54□□□□□ -0.24
GPC3-202ENST00000394299 SETD6Q8TBK2 473 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 RNF138Q8WVD3 245 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 ACOT12Q8WYK0 555 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 TTC9Q92623 222 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 KLHL15Q96M94 604 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 CYSLTR2Q9NS75 346 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 MRPL39Q9NYK5 338 aaKnown RBP13.54□□□□□ -0.24
GPC3-202ENST00000394299 WIF1Q9Y5W5 379 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 IGHV1-45A0A0A0MS14 117 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 IGLV1-36A0A0B4J1U3 117 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 TRAV1-2A0A0B4J238 106 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 ZNF879B4DU55 563 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 FLRT2O43155 660 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 DOK2O60496 412 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 DKK1O94907 266 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 KRT8P05787 483 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 SPARCP09486 303 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 FBXO45P0C2W1 286 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 NAGAP17050 411 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 CFL1P23528 166 aaKnown RBP13.54□□□□□ -0.24
GPC3-202ENST00000394299 APOBEC1P41238 236 aaKnown RBP13.54□□□□□ -0.24
GPC3-202ENST00000394299 HTR3AP46098 478 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 CAPZA2P47755 286 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 CLDN12P56749 244 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 OR2B6P58173 313 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 PUDPQ08623 228 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 ASAH1Q13510 395 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 ALKBH1Q13686 389 aaKnown RBP13.54□□□□□ -0.24
GPC3-202ENST00000394299 PLPPR5Q32ZL2 321 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 RNASE12Q5GAN4 147 aaKnown RBP13.54□□□□□ -0.24
GPC3-202ENST00000394299 HES5Q5TA89 166 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 WDSUB1Q8N9V3 476 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 SPACA9Q96E40 222 aaPredicted RBP13.54□□□□□ -0.24
GPC3-202ENST00000394299 ABHD1Q96SE0 405 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms