RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 TRAPPC6BQ86SZ2 158 aa7.91□□□□□ -1.14
GABRA1-202ENST00000393943 OR4N5Q8IXE1 308 aa7.91□□□□□ -1.14
GABRA1-202ENST00000393943 GAL3ST4Q96RP7 486 aa7.91□□□□□ -1.14
GABRA1-202ENST00000393943 SLC22A12Q96S37 553 aa7.91□□□□□ -1.14
GABRA1-202ENST00000393943 NMNAT3Q96T66 252 aa7.91□□□□□ -1.14
GABRA1-202ENST00000393943 INSM2Q96T92 566 aaPredicted RBP7.91□□□□□ -1.14
GABRA1-202ENST00000393943 UBQLN4Q9NRR5 601 aa7.91□□□□□ -1.14
GABRA1-202ENST00000393943 C2orf42Q9NWW7 574 aa7.91□□□□□ -1.14
GABRA1-202ENST00000393943 ZNF98A6NK75 572 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 LGALS8O00214 317 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 ABCD4O14678 606 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 SLC31A1O15431 190 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 STK17BO94768 372 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 SCGB1D2O95969 90 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 SLC35E2P0CK97 266 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 ACHEP22303 614 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 VASPP50552 380 aaPredicted RBP7.9□□□□□ -1.14
GABRA1-202ENST00000393943 HERV-K104P61576 105 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 C14orf28Q4W4Y0 310 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 RGS7BPQ6MZT1 257 aaPredicted RBP7.9□□□□□ -1.14
GABRA1-202ENST00000393943 ZNF687Q8N1G0 1237 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 ZNF565Q8N9K5 539 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 TERB2Q8NHR7 220 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 PELI1Q96FA3 418 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 CNTNAP3Q9BZ76 1288 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 GPR55Q9Y2T6 319 aaPredicted RBP7.9□□□□□ -1.14
GABRA1-202ENST00000393943 NPTNQ9Y639 398 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 COL4A5P29400 1685 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 SERINC4A6NH21 518 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 K7EPK0 472 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 SLC17A2O00624 439 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 SYT7O43581 403 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 BPNT1O95861 308 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 ITGA5P08648 1049 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 HOXD4P09016 255 aaPredicted RBP7.9□□□□□ -1.14
GABRA1-202ENST00000393943 MAGEB1P43366 347 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 F2RL1P55085 397 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 CST6Q15828 149 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 USF2Q15853 346 aaPredicted RBP7.9□□□□□ -1.14
GABRA1-202ENST00000393943 FAM27D1Q5T7N8 215 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 FOXRED2Q8IWF2 684 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 FAM71E2Q8N5Q1 922 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 EIF4E3Q8N5X7 224 aaKnown RBP7.9□□□□□ -1.14
GABRA1-202ENST00000393943 OR52R1Q8NGF1 315 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 SAT2Q96F10 170 aaPredicted RBP7.9□□□□□ -1.14
GABRA1-202ENST00000393943 WDR89Q96FK6 387 aaPredicted RBP7.9□□□□□ -1.14
GABRA1-202ENST00000393943 KLK11Q9UBX7 282 aa7.9□□□□□ -1.14
GABRA1-202ENST00000393943 FAM230AA0A1W2PPH8 454 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 ZNF254O75437 659 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 BDKRB2P30411 391 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 HSD11B2P80365 405 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 TUSC1Q2TAM9 212 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 SLC22A24Q8N4F4 322 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 OR56B1Q8NGI3 324 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 HERVK_113Q902F9 699 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 PPP1R14AQ96A00 147 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 CNRIP1Q96F85 164 aaPredicted RBP7.9□□□□□ -1.15
GABRA1-202ENST00000393943 ENKD1Q9H0I2 346 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 NIT2Q9NQR4 276 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 INSL6Q9Y581 213 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 PLXNB2O15031 1838 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 A0A0B4J293 547 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 PLSCR5A0PG75 271 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 ZNF860A6NHJ4 632 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 SOX1O00570 391 aaPredicted RBP7.9□□□□□ -1.15
GABRA1-202ENST00000393943 HIST1H1CP16403 213 aaKnown RBP7.9□□□□□ -1.15
GABRA1-202ENST00000393943 PTAFRP25105 342 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 SDHAP31040 664 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 AFF3P51826 1226 aaKnown RBP7.9□□□□□ -1.15
GABRA1-202ENST00000393943 DCAF7P61962 342 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 DHODHQ02127 395 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 MFGE8Q08431 387 aaPredicted RBP7.9□□□□□ -1.15
GABRA1-202ENST00000393943 LINC00518Q8N0U6 118 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 DTWD2Q8NBA8 298 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 SUMF2Q8NBJ7 301 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 BPIFCQ8NFQ6 507 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 OR5M1Q8NGP8 315 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 OR4K15Q8NH41 348 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 HOXB13Q92826 284 aaPredicted RBP7.9□□□□□ -1.15
GABRA1-202ENST00000393943 DERL3Q96Q80 235 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 ZNF251Q9BRH9 671 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.9□□□□□ -1.15
GABRA1-202ENST00000393943 SLAMF7Q9NQ25 335 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 GABRQQ9UN88 632 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 HIF3AQ9Y2N7 669 aa7.9□□□□□ -1.15
GABRA1-202ENST00000393943 A0A0J9YY10 115 aa7.89□□□□□ -1.15
GABRA1-202ENST00000393943 DCDC2BA2VCK2 349 aa7.89□□□□□ -1.15
GABRA1-202ENST00000393943 ZNF726A6NNF4 738 aa7.89□□□□□ -1.15
GABRA1-202ENST00000393943 TRIM77I1YAP6 450 aa7.89□□□□□ -1.15
GABRA1-202ENST00000393943 BHLHE40O14503 412 aa7.89□□□□□ -1.15
GABRA1-202ENST00000393943 HCRTR2O43614 444 aa7.89□□□□□ -1.15
GABRA1-202ENST00000393943 CTNSO60931 367 aa7.89□□□□□ -1.15
GABRA1-202ENST00000393943 MT-ATP6P00846 226 aa7.89□□□□□ -1.15
GABRA1-202ENST00000393943 FGF2P09038 288 aa7.89□□□□□ -1.15
GABRA1-202ENST00000393943 RGS19P49795 217 aa7.89□□□□□ -1.15
GABRA1-202ENST00000393943 ESPNLQ6ZVH7 1005 aa7.89□□□□□ -1.15
GABRA1-202ENST00000393943 ZNF595Q8IYB9 648 aa7.89□□□□□ -1.15
GABRA1-202ENST00000393943 C15orf54Q8N8G6 183 aa7.89□□□□□ -1.15
GABRA1-202ENST00000393943 KCNG3Q8TAE7 436 aa7.89□□□□□ -1.15
GABRA1-202ENST00000393943 NPAS1Q99742 590 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms