RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 ARRB1P49407 418 aaPredicted RBP11.74□□□□□ -0.53
USP11-204ENST00000377107 P2RX3P56373 397 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 OR1D5P58170 312 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 GFOD2Q3B7J2 385 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 TCTE1Q5JU00 501 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 OVCH1Q7RTY7 1134 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 LINC00346Q8IVM7 164 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 COQ8AQ8NI60 647 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 DUSP19Q8WTR2 217 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 SLC25A38Q96DW6 304 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 GDF15Q99988 308 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 LMF2Q9BU23 707 aaKnown RBP11.74□□□□□ -0.53
USP11-204ENST00000377107 MMP25Q9NPA2 562 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 ZFP64Q9NPA5 681 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 POLE3Q9NRF9 147 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 HAO2Q9NYQ3 351 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 RDH8Q9NYR8 311 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 AKAP7Q9P0M2 348 aaPredicted RBP11.74□□□□□ -0.53
USP11-204ENST00000377107 CGGBP1Q9UFW8 167 aaPredicted RBP11.74□□□□□ -0.53
USP11-204ENST00000377107 IGKV1D-42A0A075B6H8 117 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 H3BML4 177 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 L7N2F9 121 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 SLC22A5O76082 557 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 MPZL1O95297 269 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 WISP1O95388 367 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 SPOCK1Q08629 439 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 ATXN7L3Q14CW9 347 aaPredicted RBP11.74□□□□□ -0.53
USP11-204ENST00000377107 ZMYND11Q15326 602 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 GRK1Q15835 563 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 CD276Q5ZPR3 534 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 NLRC3Q7RTR2 1065 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 PLCL2Q9UPR0 1127 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 HS3ST3A1Q9Y663 406 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 C2CD4DB7Z1M9 353 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 GPRIN2O60269 458 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 SRPX2O60687 465 aaPredicted RBP11.74□□□□□ -0.53
USP11-204ENST00000377107 RORAP35398 523 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 GNALP38405 381 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 P2RX1P51575 399 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 EFNB2P52799 333 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 PER3P56645 1201 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 TAS2R20P59543 309 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 CBFBQ13951 182 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 ZNF141Q15928 474 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 LGALSLQ3ZCW2 172 aaPredicted RBP11.74□□□□□ -0.53
USP11-204ENST00000377107 TEX261Q6UWH6 196 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 ZNF227Q86WZ6 799 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 C5orf34Q96MH7 638 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 CMKLR1Q99788 373 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 ZNF436Q9C0F3 470 aaPredicted RBP11.74□□□□□ -0.53
USP11-204ENST00000377107 CUTCQ9NTM9 273 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 U3KQ87 197 aa11.74□□□□□ -0.53
USP11-204ENST00000377107 FREM3P0C091 2139 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.73□□□□□ -0.53
USP11-204ENST00000377107 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.73□□□□□ -0.53
USP11-204ENST00000377107 UBE2QL1A1L167 161 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 FAM25EA8MYX2 175 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 CFDP00746 253 aaPredicted RBP11.73□□□□□ -0.53
USP11-204ENST00000377107 GP1BBP13224 206 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 SDHAP31040 664 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 FNTBP49356 437 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 ARPC4P59998 168 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 RIN1Q13671 783 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 EXOSC2Q13868 293 aaKnown RBP11.73□□□□□ -0.53
USP11-204ENST00000377107 ELOCQ15369 112 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 NKPD1Q17RQ9 610 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 MANEAQ5SRI9 462 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 ZBTB37Q5TC79 503 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 FAM199XQ6PEV8 388 aaPredicted RBP11.73□□□□□ -0.53
USP11-204ENST00000377107 COMMD7Q86VX2 200 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 CHST4Q8NCG5 386 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 FAM46BQ96A09 425 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 TCTN2Q96GX1 697 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 MAP6Q96JE9 813 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 KLHL15Q96M94 604 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 TSPAN32Q96QS1 320 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 GFI1Q99684 422 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 MESP1Q9BRJ9 268 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 NUDT22Q9BRQ3 303 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 JAM3Q9BX67 310 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 DLL4Q9NR61 685 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 COPZ2Q9P299 210 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 PCDHGA9Q9Y5G4 932 aaKnown RBP11.73□□□□□ -0.53
USP11-204ENST00000377107 SHISA8B8ZZ34 492 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 RAF1P04049 648 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 PNMTP11086 282 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 ADRA2CP18825 462 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 KLF9Q13886 244 aaPredicted RBP11.73□□□□□ -0.53
USP11-204ENST00000377107 MESTQ5EB52 335 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 SLC6A19Q695T7 634 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 PWWP2BQ6NUJ5 590 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 CORO6Q6QEF8 472 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 ALKAL2Q6UX46 152 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 NDUFAF7Q7L592 441 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 SLC16A9Q7RTY1 509 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 OR2G2Q8NGZ5 317 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 EXO5Q9H790 373 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 EMC7Q9NPA0 242 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 CA10Q9NS85 328 aa11.73□□□□□ -0.53
USP11-204ENST00000377107 KIF26BQ2KJY2 2108 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms