RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 DND1Q8IYX4 353 aaKnown RBP8.66□□□□□ -1.02
TRIM39-202ENST00000376659 GATSQ8NAP1 163 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 NSMAFQ92636 917 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 TGM7Q96PF1 710 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 LIN7BQ9HAP6 207 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 NUDT15Q9NV35 164 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 PIPOXQ9P0Z9 390 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 NCKAP5O14513 1909 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 H0YC42 278 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 AGRPO00253 132 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 KHNYNO15037 678 aaKnown RBP8.66□□□□□ -1.02
TRIM39-202ENST00000376659 LDLRAD4O15165 306 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 CDC40O60508 579 aaKnown RBP eCLIP8.66□□□□□ -1.02
TRIM39-202ENST00000376659 HPXP02790 462 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 SYPP08247 313 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 FOLR1P15328 257 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 TACR3P29371 465 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 GRPRP30550 384 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 CAMK2DQ13557 499 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 ZNF385CQ66K41 422 aaPredicted RBP8.66□□□□□ -1.02
TRIM39-202ENST00000376659 ASB18Q6ZVZ8 466 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 KCTD20Q7Z5Y7 419 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 GKN2Q86XP6 184 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 UBASH3BQ8TF42 649 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 TTC9Q92623 222 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 HAVCR1Q96D42 359 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 OR2M2Q96R28 347 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 TPSD1Q9BZJ3 242 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 C20orf85Q9H1P6 137 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 CAPN10Q9HC96 672 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 HRASLSQ9HDD0 168 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 RXFP3Q9NSD7 469 aa8.66□□□□□ -1.02
TRIM39-202ENST00000376659 EML6Q6ZMW3 1958 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 WIPF3A6NGB9 483 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 GABARAPH6UMI1 98 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 H7C1C5 153 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 ZNF217O75362 1048 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 PIAS2O75928 621 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 TGM6O95932 706 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 PNPP00491 289 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 MT-ND4P03905 459 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 F13BP05160 661 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 OR8G3PP0DMU2 310 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 CTSEP14091 401 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 FOSL2P15408 326 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 ATF4P18848 351 aaPredicted RBP8.65□□□□□ -1.02
TRIM39-202ENST00000376659 MAOBP27338 520 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 ABCD3P28288 659 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 GDNFP39905 211 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 PTGDSP41222 190 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 P2RX1P51575 399 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 CCR9P51686 369 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 LCN6P62502 163 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 LIPNQ5VXI9 398 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 ZNF782Q6ZMW2 699 aaPredicted RBP8.65□□□□□ -1.02
TRIM39-202ENST00000376659 ADGRG3Q86Y34 549 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 SLC25A45Q8N413 288 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 ZNF614Q8N883 585 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 APCDD1LQ8NCL9 501 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 OR1N1Q8NGS0 311 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 OTOSQ8NHW6 89 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 GPR119Q8TDV5 335 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 MIB2Q96AX9 1013 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 C4orf45Q96LM5 186 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 MNTQ99583 582 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 ZNF576Q9H609 170 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 DLL4Q9NR61 685 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 FAM171A2A8MVW0 826 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 PSMD9O00233 223 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 CLDN4O14493 209 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 GPR171O14626 319 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 IL11P20809 199 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 GIFP27352 417 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 Q499Y3 187 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 FAM205BPQ63HN1 556 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 OR2G2Q8NGZ5 317 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 DNASE2BQ8WZ79 361 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 VN1R1Q9GZP7 353 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 DCAF16Q9NXF7 216 aa8.65□□□□□ -1.02
TRIM39-202ENST00000376659 WDFY4Q6ZS81 3184 aa8.65□□□□□ -1.03
TRIM39-202ENST00000376659 LOC390937A0A1W2PQ73 354 aa8.64□□□□□ -1.03
TRIM39-202ENST00000376659 RPS10-NUDT3A0A1W2PQS6 291 aa8.64□□□□□ -1.03
TRIM39-202ENST00000376659 OR6C76A6NM76 312 aa8.64□□□□□ -1.03
TRIM39-202ENST00000376659 FABP7O15540 132 aa8.64□□□□□ -1.03
TRIM39-202ENST00000376659 SELENOPP49908 381 aa8.64□□□□□ -1.03
TRIM39-202ENST00000376659 P2RY4P51582 365 aa8.64□□□□□ -1.03
TRIM39-202ENST00000376659 MRPL28Q13084 256 aaKnown RBP8.64□□□□□ -1.03
TRIM39-202ENST00000376659 SMAD4Q13485 552 aaKnown RBP8.64□□□□□ -1.03
TRIM39-202ENST00000376659 GRM7Q14831 915 aa8.64□□□□□ -1.03
TRIM39-202ENST00000376659 SGCBQ16585 318 aa8.64□□□□□ -1.03
TRIM39-202ENST00000376659 DEFB133Q30KQ1 61 aa8.64□□□□□ -1.03
TRIM39-202ENST00000376659 WDR38Q5JTN6 314 aa8.64□□□□□ -1.03
TRIM39-202ENST00000376659 FAM122CQ6P4D5 195 aa8.64□□□□□ -1.03
TRIM39-202ENST00000376659 Q6ZTK2 550 aa8.64□□□□□ -1.03
TRIM39-202ENST00000376659 SLC36A1Q7Z2H8 476 aa8.64□□□□□ -1.03
TRIM39-202ENST00000376659 MARCH3Q86UD3 253 aa8.64□□□□□ -1.03
TRIM39-202ENST00000376659 CDH24Q86UP0 819 aa8.64□□□□□ -1.03
TRIM39-202ENST00000376659 LURAP1LQ8IV03 231 aa8.64□□□□□ -1.03
TRIM39-202ENST00000376659 IZUMO1Q8IYV9 350 aa8.64□□□□□ -1.03
TRIM39-202ENST00000376659 EID2Q8N6I1 236 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms