RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 FIGLAQ6QHK4 219 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 KDF1Q8NAX2 398 aaPredicted RBP9.42□□□□□ -0.9
PTCH1-204ENST00000375290 RPH3AQ9Y2J0 694 aaPredicted RBP9.42□□□□□ -0.9
PTCH1-204ENST00000375290 BRINP1O60477 761 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 IL33O95760 270 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 ZNF85Q03923 595 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 LYG2Q86SG7 212 aa9.42□□□□□ -0.9
PTCH1-204ENST00000375290 MAN2B1O00754 1011 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 CSNK1A1P48729 337 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 HOXA1P49639 335 aaPredicted RBP9.41□□□□□ -0.9
PTCH1-204ENST00000375290 SOX4Q06945 474 aaPredicted RBP9.41□□□□□ -0.9
PTCH1-204ENST00000375290 CST6Q15828 149 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 OR2G6Q5TZ20 316 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 KANSL1Q7Z3B3 1105 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 KLF16Q9BXK1 252 aaPredicted RBP9.41□□□□□ -0.9
PTCH1-204ENST00000375290 SLC17A9Q9BYT1 436 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 P2RY12Q9H244 342 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 FOXJ3Q9UPW0 622 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 B3GALT5Q9Y2C3 310 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 ADAMTS7Q9UKP4 1686 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.41□□□□□ -0.9
PTCH1-204ENST00000375290 SNAI1O95863 264 aaPredicted RBP9.41□□□□□ -0.9
PTCH1-204ENST00000375290 DCBLD2Q96PD2 775 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 SEC11CQ9BY50 192 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 A0A087WV62 115 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 ACTL6BO94805 426 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 POU3F4P49335 361 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 DVL1P1P54792 670 aaPredicted RBP9.41□□□□□ -0.9
PTCH1-204ENST00000375290 SLC35A1P78382 337 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 DHODHQ02127 395 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 FPGSQ05932 587 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 DOK3Q7L591 496 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 FAM213BQ8TBF2 198 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 MOCOSQ96EN8 888 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 SCMH1Q96GD3 660 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 TCTN2Q96GX1 697 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 FKRPQ9H9S5 495 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 MRPL15Q9P015 296 aaKnown RBP9.41□□□□□ -0.9
PTCH1-204ENST00000375290 ANKRD61A6NGH8 418 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 KIAA1024LP59773 190 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 OR6S1Q8NH40 331 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 CYB5D2Q8WUJ1 264 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 TEAD3Q99594 435 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 PUS1Q9Y606 427 aaKnown RBP eCLIP9.41□□□□□ -0.9
PTCH1-204ENST00000375290 MCRIP1C9JLW8 97 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 SCD5Q86SK9 330 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 CLEC1AQ8NC01 280 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 LINC01599Q8WXQ3 324 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 GPR160Q9UJ42 338 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 FBXL2Q9UKC9 423 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 TMX2-CTNND1H3BSU7 103 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 GPX5O75715 221 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 SOD1P00441 154 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 RHOP08100 348 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 SLC6A12P48065 614 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 OR10A3P58181 314 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 SLC22A6Q4U2R8 563 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 PRAMEF26H0Y7S4 382 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 H7BYZ3 331 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 TMEM201Q5SNT2 666 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 DND1Q8IYX4 353 aaKnown RBP9.41□□□□□ -0.9
PTCH1-204ENST00000375290 OR4D10Q8NGI6 311 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 BCAS3Q9H6U6 928 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 LDAHQ9H6V9 325 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 ETV5P41161 510 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 EBPQ15125 230 aaKnown RBP9.41□□□□□ -0.9
PTCH1-204ENST00000375290 RAB30Q15771 203 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 ZNF684Q5T5D7 378 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 MRPL21Q7Z2W9 205 aaKnown RBP9.41□□□□□ -0.9
PTCH1-204ENST00000375290 GPX8Q8TED1 209 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 OPALINQ96PE5 141 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 PLK3Q9H4B4 646 aa9.41□□□□□ -0.9
PTCH1-204ENST00000375290 TRAPPC2LH3BP13 241 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 AGPAT2O15120 278 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 CST4P01036 141 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 SNRPBP14678 240 aaKnown RBP9.4□□□□□ -0.9
PTCH1-204ENST00000375290 DIO1P49895 249 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 CTBSQ01459 385 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 CLINT1Q14677 625 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 STRADBQ9C0K7 418 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 CHST8Q9H2A9 424 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 LHX3Q9UBR4 397 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 ANGPTL7O43827 346 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 PXYLP1Q8TE99 480 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 C2orf72A6NCS6 295 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 GP1BAP07359 652 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 MEOX2P50222 304 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 HMGA2P52926 109 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 ABLIM2Q6H8Q1 611 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 PSMF1Q92530 271 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 PMEPA1Q969W9 287 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 FGF18O76093 207 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 HIST1H3AP68431 136 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 OR2AK2Q8NG84 335 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 NIPSNAP1Q9BPW8 284 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 FAM166BA8MTA8 275 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 TARM1B6A8C7 271 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 FBXO24O75426 580 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 SLC6A1P30531 599 aa9.4□□□□□ -0.9
PTCH1-204ENST00000375290 LRRC73Q5JTD7 316 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms