RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 U3KQA8 63 aa7.88□□□□□ -1.15
SNRNP40-202ENST00000373720 FAM240BA0A1B0GVZ2 78 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 A0A1W2PQ09 198 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 TRABD2BA6NFA1 517 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 CD8B2A6NJW9 211 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 LRRN3E7EW58 273 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 KHDRBS3O75525 346 aaKnown RBP7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 APOL3O95236 402 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 DHFRP00374 187 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 APOC1P02654 83 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 CD8BP10966 210 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 CD37P11049 281 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 IMPDH2P12268 514 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 ZNF823P16415 610 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 ZNF17P17021 662 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 ACVR1BP36896 505 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 MAP2K3P46734 347 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 OR2B6P58173 313 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 LTBQ06643 244 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 SELENBP1Q13228 472 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 ACKR1Q16570 336 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 MESTQ5EB52 335 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 IDNKQ5T6J7 187 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 LCE2CQ5TA81 110 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 C1orf189Q5VU69 101 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 DESI1Q6ICB0 168 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 OR6V1Q8N148 313 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 YIPF7Q8N8F6 280 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 ZNF321PQ8N8H1 164 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 OR2Y1Q8NGV0 311 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 RNF128Q8TEB7 428 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 DOK4Q8TEW6 326 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 SPACA9Q96E40 222 aaPredicted RBP7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 GUCD1Q96NT3 240 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 IP6K3Q96PC2 410 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 MOGAT1Q96PD6 335 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 TSPAN32Q96QS1 320 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 OR8B4Q96RC9 309 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 MARVELD1Q9BSK0 173 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 RNF32Q9H0A6 362 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 CHST11Q9NPF2 352 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 KLHL1Q9NR64 748 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 EXTL2Q9UBQ6 330 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 CTSFQ9UBX1 484 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 ZNF107Q9UII5 783 aaPredicted RBP7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 CDV3Q9UKY7 258 aaKnown RBP7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 TBC1D24Q9ULP9 559 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 RASD1Q9Y272 281 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 WIF1Q9Y5W5 379 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 V9GY05 133 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 SPAG17Q6Q759 2223 aa7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 TDRD6O60522 2096 aaKnown RBP7.87□□□□□ -1.15
SNRNP40-202ENST00000373720 RANBP2P49792 3224 aaKnown RBP7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 TRBV11-1A0A0K0K1C0 115 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 TMEM72A0PK05 275 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 SLC22A23A1A5C7 686 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 IFITM5A6NNB3 132 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 NPIPA5E9PKD4 350 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 LYRM1O43325 122 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 HPGDSO60760 199 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 PRAF2O60831 178 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 UPK3AO75631 287 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 CFIP05156 583 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 MRPL3P09001 348 aaKnown RBP7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 CLEC2LP0C7M8 214 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 UBCP0CG48 685 aaKnown RBP7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 AHCYP23526 432 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 SHC1P29353 583 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 GRPRP30550 384 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 THBS2P35442 1172 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 FAUP35544 74 aaKnown RBP7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 MMP16P51512 607 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 RIDAP52758 137 aaKnown RBP7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 RPS11P62280 158 aaKnown RBP eCLIP7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 SLC35A1P78382 337 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 TLE3Q04726 772 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 CSTF1Q05048 431 aaKnown RBP7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 BAK1Q16611 211 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 DCAF12Q5T6F0 453 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 TMEM244Q5VVB8 128 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 LIPNQ5VXI9 398 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 JMJD6Q6NYC1 403 aaPredicted RBP7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 ASB18Q6ZVZ8 466 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 NDUFAF7Q7L592 441 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 NRARPQ7Z6K4 114 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 DEFB123Q8N688 67 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 NKAIN3Q8N8D7 197 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 SAMD12Q8N8I0 201 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 BMPERQ8N8U9 685 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 FADS6Q8N9I5 356 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 ZBTB44Q8NCP5 570 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 FAM83FQ8NEG4 500 aaPredicted RBP7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 TRMT10AQ8TBZ6 339 aaKnown RBP7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 HTRA1Q92743 480 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 NTNG2Q96CW9 530 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 RASD2Q96D21 266 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 IMMP1LQ96LU5 166 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 DERL3Q96Q80 235 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 TBX5Q99593 518 aa7.86□□□□□ -1.15
SNRNP40-202ENST00000373720 WDR77Q9BQA1 342 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms