RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 FJX1Q86VR8 437 aa20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 ZC3HAV1LQ96H79 300 aaKnown RBP20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 CRYBG1Q9Y4K1 1723 aa20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 PRAMEF25A6NGN4 478 aa20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 IMPA2O14732 288 aa20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 STEAP3Q658P3 488 aa20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 STEAP1BQ6NZ63 245 aa20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 KDM8Q8N371 416 aa20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 A0A1B0GTW7 788 aa20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 PAPLNO95428 1278 aa20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 MTHFD2P13995 350 aa20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 SLC46A3Q7Z3Q1 461 aa20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 SVBPQ8N300 66 aa20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 CHST8Q9H2A9 424 aa20.41■□□□□ 0.86
TM9SF3-201ENST00000371142 EIF1BO60739 113 aaKnown RBP20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 ALOX12BO75342 701 aa20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 FPR3P25089 353 aa20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 HOXD12P35452 270 aa20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 FAM71E1Q6IPT2 247 aa20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 PGAP1Q75T13 922 aa20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 GOT1L1Q8NHS2 421 aaPredicted RBP20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 NUDT8Q8WV74 236 aa20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 CHD2O14647 1828 aaKnown RBP20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 AKR7A3O95154 331 aa20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 EDDM3AQ14507 147 aa20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 LINC01599Q8WXQ3 324 aa20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 FAM212BQ9NTI7 297 aaPredicted RBP20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 PDE4DIPQ5VU43 2346 aa20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 ABHD6Q9BV23 337 aa20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 PLPP1O14494 284 aa20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 NAGAP17050 411 aa20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 MKRN2Q9H000 416 aaKnown RBP20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 PIGAP37287 484 aa20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 KCNAB1Q14722 419 aa20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 PHLDA2Q53GA4 152 aa20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 PARM1Q6UWI2 310 aa20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 WDR5BQ86VZ2 330 aa20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 CELF2-AS1Q8N7Q2 184 aa20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 BHLHE23Q8NDY6 225 aa20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 FAM3DQ96BQ1 224 aa20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 COA3Q9Y2R0 106 aaPredicted RBP20.4■□□□□ 0.86
TM9SF3-201ENST00000371142 C5P01031 1676 aa20.39■□□□□ 0.86
TM9SF3-201ENST00000371142 ARPC4-TTLL3A0A0A6YYG9 625 aa20.39■□□□□ 0.86
TM9SF3-201ENST00000371142 SLC2A1P11166 492 aa20.39■□□□□ 0.86
TM9SF3-201ENST00000371142 EIF2DP41214 584 aaKnown RBP20.39■□□□□ 0.86
TM9SF3-201ENST00000371142 THBS3P49746 956 aa20.39■□□□□ 0.86
TM9SF3-201ENST00000371142 C1orf140Q5VVS0 124 aa20.39■□□□□ 0.86
TM9SF3-201ENST00000371142 RBM45Q8IUH3 476 aaKnown RBP20.39■□□□□ 0.86
TM9SF3-201ENST00000371142 SCCPDHQ8NBX0 429 aa20.39■□□□□ 0.86
TM9SF3-201ENST00000371142 UBR2Q8IWV8 1755 aa20.39■□□□□ 0.86
TM9SF3-201ENST00000371142 A8MVM7 634 aa20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 SYT5O00445 386 aa20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 FABP7O15540 132 aa20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 EIF1P41567 113 aaKnown RBP20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 FXNQ16595 210 aa20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 SUMF1Q8NBK3 374 aa20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 SPPL3Q8TCT6 385 aa20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 GON7Q9BXV9 100 aa20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 KLK4Q9Y5K2 254 aa20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 EFSO43281 561 aa20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 UBL3O95164 117 aa20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 CD14P08571 375 aa20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 ANXA7P20073 488 aaKnown RBP20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 PLPP5Q8NEB5 264 aa20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 EPHX3Q9H6B9 360 aa20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 PMPCAQ10713 525 aa20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 GLIPR1L1Q6UWM5 242 aa20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 STT3BQ8TCJ2 826 aa20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 GAB3Q8WWW8 586 aa20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 PSD2Q9BQI7 771 aa20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 TMEM38AQ9H6F2 299 aa20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 A0A1B0GX78 115 aa20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 NPBWR1P48145 328 aa20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 TMEM178AQ8NBL3 297 aa20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 PADI1Q9ULC6 663 aa20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 GPR55Q9Y2T6 319 aaPredicted RBP20.39■□□□□ 0.85
TM9SF3-201ENST00000371142 LOC100289279A0A1B0GTE1 492 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 AGAP14A8MT82 685 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 SRMP19623 302 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 TPMTP51580 245 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 TLE4Q04727 773 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 PELI3Q8N2H9 469 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 CLDN22Q8N7P3 220 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 KIR3DX1Q9H7L2 352 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 SLC39A9Q9NUM3 307 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 HBG1P69891 147 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 HBG2P69892 147 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 SMIM15Q7Z3B0 74 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 FAM71CQ8NEG0 241 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 CGGBP1Q9UFW8 167 aaPredicted RBP20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 CORINQ9Y5Q5 1042 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 LINC01553A4QN01 128 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 LRIT2A6NDA9 550 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 OR5K3A6NET4 321 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 CPT2P23786 658 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 NFYBP25208 207 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 TEAD1P28347 426 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 TMEM207Q6UWW9 146 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 CD300LGQ6UXG3 332 aa20.38■□□□□ 0.85
TM9SF3-201ENST00000371142 UBE2FQ969M7 185 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms