RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 CCSMST1Q4G0I0 132 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 DPY19L4Q7Z388 723 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 BAP18Q8IXM2 172 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 CHTF18Q8WVB6 975 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 RASD2Q96D21 266 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 NICN1Q9BSH3 213 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 PDE7BQ9NP56 450 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 POLMQ9NP87 494 aaPredicted RBP11.73□□□□□ -0.53
GPC4-201ENST00000370828 CYSLTR2Q9NS75 346 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 TAS2R5Q9NYW4 299 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 STEAP1Q9UHE8 339 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 NUP214P35658 2090 aaPredicted RBP11.73□□□□□ -0.53
GPC4-201ENST00000370828 SNRPGP15A8MWD9 76 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 SERPINA7P05543 415 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 ENPP1P22413 925 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 SDHAP31040 664 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 CX3CR1P49238 355 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 NPY4RP50391 375 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 PFN3P60673 137 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 SCGB2A2Q13296 93 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 ZNF385BQ569K4 471 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 LPCAT3Q6P1A2 487 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 Q6ZRG5 221 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 ERN2Q76MJ5 926 aaKnown RBP11.72□□□□□ -0.53
GPC4-201ENST00000370828 MSRB3Q8IXL7 192 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 OR1S1Q8NH92 325 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 MIB2Q96AX9 1013 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 TMEM18Q96B42 140 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 TGM7Q96PF1 710 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 PARP4Q9UKK3 1724 aaKnown RBP11.72□□□□□ -0.53
GPC4-201ENST00000370828 LINC00862A6NCI5 91 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 HBQ1P09105 142 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 CXCL3P19876 107 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 GABRR1P24046 479 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 FOXO1Q12778 655 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 IQCJQ1A5X6 159 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 CNKSR3Q6P9H4 555 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 MMP21Q8N119 569 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 OR10D4PQ8NGN7 298 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 APH1BQ8WW43 257 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 OPN3Q9H1Y3 402 aaPredicted RBP11.72□□□□□ -0.53
GPC4-201ENST00000370828 FAM96BQ9Y3D0 163 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 GLULP15104 373 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 GABRA2P47869 451 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 SPCS3P61009 180 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 GLYATL3Q5SZD4 288 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 MDGA2Q7Z553 956 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 RAB7BQ96AH8 199 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 BORCS8Q96FH0 119 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 EVA1AQ9H8M9 152 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 LHX3Q9UBR4 397 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 V9GYH0 126 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 TMEM269A0A1B0GVZ9 245 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 SELENOFO60613 162 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 HIST1H1TP22492 207 aaPredicted RBP11.72□□□□□ -0.53
GPC4-201ENST00000370828 RPS15AP62244 130 aaKnown RBP11.72□□□□□ -0.53
GPC4-201ENST00000370828 CDK3Q00526 305 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 HNF4GQ14541 408 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 ZNF239Q16600 458 aaKnown RBP11.72□□□□□ -0.53
GPC4-201ENST00000370828 FBXW12Q6X9E4 464 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 OVCH1Q7RTY7 1134 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 DCXRQ7Z4W1 244 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 ZNF440Q8IYI8 595 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 PCDHB10Q9UN67 800 aa11.72□□□□□ -0.53
GPC4-201ENST00000370828 WNT1P04628 370 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 GBX1Q14549 363 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 ZNF750Q32MQ0 723 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 TMEM244Q5VVB8 128 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 CALHM3Q86XJ0 350 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 KLHDC1Q8N7A1 406 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 DYRK2Q92630 601 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 SENP5Q96HI0 755 aaPredicted RBP11.71□□□□□ -0.53
GPC4-201ENST00000370828 DERL3Q96Q80 235 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 GLIPR2Q9H4G4 154 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 ZDHHC11Q9H8X9 412 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 NCDNQ9UBB6 729 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 CPNE7Q9UBL6 633 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 IGLON5A6NGN9 336 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 PRR35P0CG20 571 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 PTHLHP12272 177 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 HNRNPKP61978 463 aaKnown RBP eCLIP11.71□□□□□ -0.53
GPC4-201ENST00000370828 SNRPNP63162 240 aaKnown RBP11.71□□□□□ -0.53
GPC4-201ENST00000370828 CCINQ13939 588 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 FAM71E1Q6IPT2 247 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 CSNK1A1LQ8N752 337 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 OR5M8Q8NGP6 311 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 C22orf15Q8WYQ4 148 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 SLC7A11Q9UPY5 501 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 NTNG1Q9Y2I2 539 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 NUP205Q92621 2012 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 TMEM200CA6NKL6 621 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 PYCARD-AS1I3L0S3 204 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 GPR31O00270 319 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 PGCP20142 388 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 RAB1AP62820 205 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 ARL6IP1Q15041 203 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 DHCR24Q15392 516 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 KCNIP4Q6PIL6 250 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 RNF113BQ8IZP6 322 aaKnown RBP11.71□□□□□ -0.53
GPC4-201ENST00000370828 LILRA3Q8N6C8 439 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms