RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 SULT1B1O43704 296 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 CTSLP07711 333 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 M6PRP20645 277 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 MSX1P28360 303 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 ALDH3B1P43353 468 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 GZMKP49863 264 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 IDH3GP51553 393 aaPredicted RBP12.61□□□□□ -0.39
VCP-201ENST00000358901 LPAL2Q16609 132 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 SLC35D3Q5M8T2 416 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 SLC51BQ86UW2 128 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 OR56B1Q8NGI3 324 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 DCLRE1CQ96SD1 692 aaKnown RBP12.61□□□□□ -0.39
VCP-201ENST00000358901 ARHGAP9Q9BRR9 750 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 MRPS28Q9Y2Q9 187 aaKnown RBP12.61□□□□□ -0.39
VCP-201ENST00000358901 LOXHD1Q8IVV2 1947 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 A0A0B4J203 849 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 C2orf72A6NCS6 295 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 SULT1C2O00338 296 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 ADPRHP54922 357 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 MTCP1P56278 107 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 MARCH3Q86UD3 253 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 COMTD1Q86VU5 262 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 PPP1R3BQ86XI6 285 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 FBXL6Q8N531 539 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 OR6M1Q8NGM8 313 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 KCNG3Q8TAE7 436 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 EID2BQ96D98 161 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 FANCFQ9NPI8 374 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 A0A1W2PS29 197 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 K7EPK0 472 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 LALBAP00709 142 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 ZNF44P15621 663 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 CTHP32929 405 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 PPT1P50897 306 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 PAPD4Q6PIY7 484 aaKnown RBP12.61□□□□□ -0.39
VCP-201ENST00000358901 FAM71E2Q8N5Q1 922 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 OR4D6Q8NGJ1 314 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 ZFAND1Q8TCF1 268 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 TCEAL3Q969E4 200 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 MIB2Q96AX9 1013 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 RSPRY1Q96DX4 576 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 TSSK2Q96PF2 358 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 SLC25A21Q9BQT8 299 aaPredicted RBP12.61□□□□□ -0.39
VCP-201ENST00000358901 B3GNT2Q9NY97 397 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 ATPIF1Q9UII2 106 aa12.61□□□□□ -0.39
VCP-201ENST00000358901 LOC100289279A0A1B0GTE1 492 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 ARRDC5A6NEK1 342 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 SLC2A1P11166 492 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 RAC2P15153 192 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 EEF1A2Q05639 463 aaKnown RBP12.6□□□□□ -0.39
VCP-201ENST00000358901 DUSP8Q13202 625 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 ASTLQ6HA08 431 aaPredicted RBP12.6□□□□□ -0.39
VCP-201ENST00000358901 CCL4L1Q8NHW4 92 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 RBPMSQ93062 196 aaKnown RBP12.6□□□□□ -0.39
VCP-201ENST00000358901 C19orf43Q9BQ61 176 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 TSPAN10Q9H1Z9 355 aaPredicted RBP12.6□□□□□ -0.39
VCP-201ENST00000358901 PLSCR3Q9NRY6 295 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 FCGR2AP12318 317 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 ZNF93P35789 620 aaPredicted RBP12.6□□□□□ -0.39
VCP-201ENST00000358901 EFNA3P52797 238 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 WNT3P56703 355 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 YBX1P67809 324 aaKnown RBP12.6□□□□□ -0.39
VCP-201ENST00000358901 CNN3Q15417 329 aaKnown RBP12.6□□□□□ -0.39
VCP-201ENST00000358901 MKXQ8IYA7 352 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 TCTEX1D2Q8WW35 142 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 WASH6PQ9NQA3 447 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 A8MVM7 634 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 PRKNO60260 465 aaPredicted RBP12.6□□□□□ -0.39
VCP-201ENST00000358901 SPNP16150 400 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 TAS2R46P59540 309 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 RPS18P62269 152 aaKnown RBP12.6□□□□□ -0.39
VCP-201ENST00000358901 C17orf67Q0P5P2 114 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 C9orf135Q5VTT2 229 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 OPN5Q6U736 354 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 GLCCI1Q86VQ1 547 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 CMIPQ8IY22 773 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 RDH10Q8IZV5 341 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 SLC22A24Q8N4F4 322 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 CSF3RQ99062 836 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 CDH20Q9HBT6 801 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 SLC25A19Q9HC21 320 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 SLAMF7Q9NQ25 335 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 MED16Q9Y2X0 877 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 AKR7A2O43488 359 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 SPI1P17947 270 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 GABRB1P18505 474 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 CLDN17P56750 224 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 GLYR1Q49A26 553 aaPredicted RBP12.6□□□□□ -0.39
VCP-201ENST00000358901 OVCH1Q7RTY7 1134 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 DCXRQ7Z4W1 244 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 ZNF683Q8IZ20 524 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 EID2Q8N6I1 236 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 ANKRD53Q8N9V6 530 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 ZNF578Q96N58 590 aaPredicted RBP12.6□□□□□ -0.39
VCP-201ENST00000358901 PLA2G12AQ9BZM1 189 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 ISG20L2Q9H9L3 353 aaKnown RBP12.6□□□□□ -0.39
VCP-201ENST00000358901 ISYNA1Q9NPH2 558 aa12.6□□□□□ -0.39
VCP-201ENST00000358901 OR5K3A6NET4 321 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 B8ZZF3 427 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 G3V3Y1 287 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms