RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 ATF6BQ99941 703 aa10□□□□□ -0.81
LRP1-202ENST00000338962 DEFB126Q9BYW3 111 aa10□□□□□ -0.81
LRP1-202ENST00000338962 OR2B2Q9GZK3 357 aa10□□□□□ -0.81
LRP1-202ENST00000338962 OR11A1Q9GZK7 315 aa10□□□□□ -0.81
LRP1-202ENST00000338962 SRRQ9GZT4 340 aa10□□□□□ -0.81
LRP1-202ENST00000338962 ZNF221Q9UK13 617 aa10□□□□□ -0.81
LRP1-202ENST00000338962 ZNF346Q9UL40 294 aaKnown RBP10□□□□□ -0.81
LRP1-202ENST00000338962 TRBV2A0A0J9YWF9 115 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 NOTOA8MTQ0 251 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 DCTN6O00399 190 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 OGG1O15527 345 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 TRIM3O75382 744 aaPredicted RBP9.99□□□□□ -0.81
LRP1-202ENST00000338962 SC5DO75845 299 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 PLGP00747 810 aaPredicted RBP9.99□□□□□ -0.81
LRP1-202ENST00000338962 SHC1P29353 583 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 BTBD16Q32M84 506 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 GLYR1Q49A26 553 aaPredicted RBP9.99□□□□□ -0.81
LRP1-202ENST00000338962 RPL22L1Q6P5R6 122 aaKnown RBP9.99□□□□□ -0.81
LRP1-202ENST00000338962 XKRXQ6PP77 449 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 PAMR1Q6UXH9 720 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 SLC16A9Q7RTY1 509 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 EXD3Q8N9H8 876 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 ACOT12Q8WYK0 555 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 ZNF486Q96H40 463 aaPredicted RBP9.99□□□□□ -0.81
LRP1-202ENST00000338962 FAM117AQ9C073 453 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 RNF32Q9H0A6 362 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 PPIL3Q9H2H8 161 aaKnown RBP9.99□□□□□ -0.81
LRP1-202ENST00000338962 PADI1Q9ULC6 663 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 VDAC3Q9Y277 283 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 SPTBN4Q9H254 2564 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 FAM172BPA6NC97 362 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 STMND1H3BQB6 276 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 HPGDSO60760 199 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 IL7P13232 177 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 EDNRAP25101 427 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 OR2B6P58173 313 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 ACKR1Q16570 336 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 IDNKQ5T6J7 187 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 SLC6A19Q695T7 634 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 BICRALQ6AI39 1079 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 HBMQ6B0K9 141 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 SIGIRRQ6IA17 410 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 C6orf15Q6UXA7 325 aaPredicted RBP9.99□□□□□ -0.81
LRP1-202ENST00000338962 FAM220AQ7Z4H9 259 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 PXKQ7Z7A4 578 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 TPRA1Q86W33 373 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 OR6V1Q8N148 313 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 ESX1Q8N693 406 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 GDPD1Q8N9F7 314 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 OR10G3Q8NGC4 313 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 LILRB4Q8NHJ6 448 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 RELTQ969Z4 430 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 METTL7AQ9H8H3 244 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 NEK6Q9HC98 313 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 TIGARQ9NQ88 270 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 MED11Q9P086 117 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 PPP4R1LQ9P1A2 415 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 RABL2AQ9UBK7 228 aaPredicted RBP9.99□□□□□ -0.81
LRP1-202ENST00000338962 ADAM30Q9UKF2 790 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 SPTBN2O15020 2390 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 KIF26BQ2KJY2 2108 aa9.99□□□□□ -0.81
LRP1-202ENST00000338962 EXPH5Q8NEV8 1989 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 PSMD9O00233 223 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 ARL6IP5O75915 188 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 APOBEC1P41238 236 aaKnown RBP9.98□□□□□ -0.81
LRP1-202ENST00000338962 BAK1Q16611 211 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 EEF1A1P5Q5VTE0 462 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 CNIH2Q6PI25 160 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 GDPD3Q7L5L3 318 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 TIGD4Q8IY51 512 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 PM20D2Q8IYS1 436 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 OR13C5Q8NGS8 318 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 ZNF417Q8TAU3 575 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 CAPSLQ8WWF8 208 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 KIAA1143Q96AT1 154 aaPredicted RBP9.98□□□□□ -0.81
LRP1-202ENST00000338962 ZNF587Q96SQ5 575 aaPredicted RBP9.98□□□□□ -0.81
LRP1-202ENST00000338962 CCDC86Q9H6F5 360 aaKnown RBP9.98□□□□□ -0.81
LRP1-202ENST00000338962 SDHAF3Q9NRP4 125 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 MRPL39Q9NYK5 338 aaKnown RBP9.98□□□□□ -0.81
LRP1-202ENST00000338962 POU2F3Q9UKI9 436 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 PTRH2Q9Y3E5 179 aaKnown RBP9.98□□□□□ -0.81
LRP1-202ENST00000338962 PCNX3Q9H6A9 2034 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 GPRIN2O60269 458 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 TACSTD2P09758 323 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 MSX1P28360 303 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 PSMB10P40306 273 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 ZNF41P51814 821 aaPredicted RBP9.98□□□□□ -0.81
LRP1-202ENST00000338962 RPL27P61353 136 aaKnown RBP9.98□□□□□ -0.81
LRP1-202ENST00000338962 SCN1BQ07699 218 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 PYDC2Q56P42 97 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 SFXN4Q6P4A7 337 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 FAM198BQ6UWH4 519 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 ARSKQ6UWY0 536 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 KCTD20Q7Z5Y7 419 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 NR2C2APQ86WQ0 139 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 RAB43Q86YS6 212 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 ZNF248Q8NDW4 579 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 IL17RDQ8NFM7 739 aa9.98□□□□□ -0.81
LRP1-202ENST00000338962 RNF138Q8WVD3 245 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms