RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 FBP1P09467 338 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 FURINP09958 794 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 FGF9P31371 208 aaPredicted RBP6.53□□□□□ -1.36
SMC1A-201ENST00000322213 RBP2P50120 134 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 PITX1P78337 314 aaPredicted RBP6.53□□□□□ -1.36
SMC1A-201ENST00000322213 DOC2BQ14184 412 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 MEX3DQ86XN8 651 aaKnown RBP6.53□□□□□ -1.36
SMC1A-201ENST00000322213 OR13C2Q8NGS9 318 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 NEIL2Q969S2 332 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 RHOFQ9HBH0 211 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 ELF5Q9UKW6 265 aaPredicted RBP6.53□□□□□ -1.36
SMC1A-201ENST00000322213 PCDHB10Q9UN67 800 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 ACOD1A6NK06 481 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 J3QR89 54 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 XRCC3O43542 346 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 HCRTO43612 131 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 OR13C7P0DN81 318 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 PSMB10P40306 273 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 NOVP48745 357 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 SPINT3P49223 89 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 SUOXP51687 545 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 DVL1P1P54792 670 aaPredicted RBP6.53□□□□□ -1.36
SMC1A-201ENST00000322213 CXCL9Q07325 125 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 OR2B11Q5JQS5 317 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 LBX2Q6XYB7 198 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 REM2Q8IYK8 340 aaPredicted RBP6.53□□□□□ -1.36
SMC1A-201ENST00000322213 NUDCD2Q8WVJ2 157 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 BOCQ9BWV1 1114 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 NXF2Q9GZY0 626 aaKnown RBP6.53□□□□□ -1.36
SMC1A-201ENST00000322213 NCOR1P1Q9H4R4 102 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 RNF150Q9ULK6 438 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 CHST2Q9Y4C5 530 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 GLTPD2A6NH11 291 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 NME2P1O60361 137 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 CTSLP07711 333 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 ACTR1BP42025 376 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 CLINT1Q14677 625 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 ST3GAL2Q16842 350 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 PKDCCQ504Y2 493 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 RTP2Q5QGT7 225 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 OPN5Q6U736 354 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 NAXEQ8NCW5 288 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 ASB11Q8WXH4 323 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 SCMH1Q96GD3 660 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 CLSTN3Q9BQT9 956 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 PIGQQ9BRB3 760 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 NICN1Q9BSH3 213 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 IL26Q9NPH9 171 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 RLIMQ9NVW2 624 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 A0A0G2JLL6 359 aaPredicted RBP6.53□□□□□ -1.36
SMC1A-201ENST00000322213 MTMR11A4FU01 709 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 M0R082 166 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 M0R143 59 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 PAPLNO95428 1278 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 GYPBP06028 91 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 ATXN1LP0C7T5 689 aaKnown RBP6.53□□□□□ -1.36
SMC1A-201ENST00000322213 PRSS56P0CW18 603 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 HOXC12P31275 282 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 ZNF84P51523 738 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 TAS2R30P59541 319 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 PRRT2Q7Z6L0 340 aaPredicted RBP6.53□□□□□ -1.36
SMC1A-201ENST00000322213 TUBB1Q9H4B7 451 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 PLEKHA3Q9HB20 300 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 TMEFF2Q9UIK5 374 aaPredicted RBP6.53□□□□□ -1.36
SMC1A-201ENST00000322213 GOLT1BQ9Y3E0 138 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 HOXB5P09067 269 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 C6P13671 934 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 AOAHP28039 575 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 PSMB3P49720 205 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 SPCS3P61009 180 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 ZNF805Q5CZA5 627 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 PET117Q6UWS5 81 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 OR1A2Q9Y585 309 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 DCDC2BA2VCK2 349 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 EPHA2P29317 976 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 MASP1P48740 699 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 ZNF133P52736 654 aaPredicted RBP6.53□□□□□ -1.36
SMC1A-201ENST00000322213 FAM109BQ6ICB4 259 aaPredicted RBP6.53□□□□□ -1.36
SMC1A-201ENST00000322213 MAMDC2Q7Z304 686 aaPredicted RBP6.53□□□□□ -1.36
SMC1A-201ENST00000322213 OR2W3Q7Z3T1 314 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 FZD3Q9NPG1 666 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 KCNK6Q9Y257 313 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 VEGFDO43915 354 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 ABCD3P28288 659 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 MAP2K5Q13163 448 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 GRM7Q14831 915 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 GALNT16Q8N428 558 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 BBS1Q8NFJ9 593 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 TMED6Q8WW62 240 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 TVP23CQ96ET8 276 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 WDR89Q96FK6 387 aaPredicted RBP6.53□□□□□ -1.36
SMC1A-201ENST00000322213 SEC22AQ96IW7 307 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 CMSS1Q9BQ75 279 aaKnown RBP6.53□□□□□ -1.36
SMC1A-201ENST00000322213 PRR14Q9BWN1 585 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 CBLCQ9ULV8 474 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 TBC1D3DA0A087WVF3 549 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 TBC1D3IA0A087WXS9 549 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 TBC1D3EA0A087X179 549 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 TBC1D3KA0A087X1G2 549 aa6.53□□□□□ -1.36
SMC1A-201ENST00000322213 LOC390937A0A1W2PQ73 354 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms