RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 PDE5AO76074 875 aa17.16■□□□□ 0.34
PDZRN3-202ENST00000308537 PRSS23O95084 383 aa17.16■□□□□ 0.34
PDZRN3-202ENST00000308537 THRBP10828 461 aa17.16■□□□□ 0.34
PDZRN3-202ENST00000308537 SEC24CP53992 1094 aa17.16■□□□□ 0.34
PDZRN3-202ENST00000308537 TAS2R41P59536 307 aa17.16■□□□□ 0.34
PDZRN3-202ENST00000308537 LIPEQ05469 1076 aa17.16■□□□□ 0.34
PDZRN3-202ENST00000308537 EFNB3Q15768 340 aa17.16■□□□□ 0.34
PDZRN3-202ENST00000308537 HACD2Q6Y1H2 254 aa17.16■□□□□ 0.34
PDZRN3-202ENST00000308537 ZNF813Q6ZN06 617 aa17.16■□□□□ 0.34
PDZRN3-202ENST00000308537 ARPINQ7Z6K5 226 aa17.16■□□□□ 0.34
PDZRN3-202ENST00000308537 OR6N1Q8NGY5 312 aa17.16■□□□□ 0.34
PDZRN3-202ENST00000308537 TMEM239Q8WW34 195 aa17.16■□□□□ 0.34
PDZRN3-202ENST00000308537 SORCS2Q96PQ0 1159 aa17.16■□□□□ 0.34
PDZRN3-202ENST00000308537 MRPL13Q9BYD1 178 aaKnown RBP17.16■□□□□ 0.34
PDZRN3-202ENST00000308537 ZNF442Q9H7R0 627 aa17.16■□□□□ 0.34
PDZRN3-202ENST00000308537 GLTPQ9NZD2 209 aa17.16■□□□□ 0.34
PDZRN3-202ENST00000308537 ABCD2Q9UBJ2 740 aa17.16■□□□□ 0.34
PDZRN3-202ENST00000308537 MALRD1Q5VYJ5 2156 aa17.16■□□□□ 0.34
PDZRN3-202ENST00000308537 RNF13O43567 381 aa17.15■□□□□ 0.34
PDZRN3-202ENST00000308537 PIP5K1CO60331 668 aa17.15■□□□□ 0.34
PDZRN3-202ENST00000308537 OR7A10O76100 309 aa17.15■□□□□ 0.34
PDZRN3-202ENST00000308537 IFNA14P01570 189 aa17.15■□□□□ 0.34
PDZRN3-202ENST00000308537 OR4A8P0C604 315 aa17.15■□□□□ 0.34
PDZRN3-202ENST00000308537 FUT1P19526 365 aa17.15■□□□□ 0.34
PDZRN3-202ENST00000308537 SERPINF1P36955 418 aa17.15■□□□□ 0.34
PDZRN3-202ENST00000308537 GSK3BP49841 420 aa17.15■□□□□ 0.34
PDZRN3-202ENST00000308537 SLC7A2P52569 658 aa17.15■□□□□ 0.34
PDZRN3-202ENST00000308537 ZNF133P52736 654 aaPredicted RBP17.15■□□□□ 0.34
PDZRN3-202ENST00000308537 NUDT6P53370 316 aa17.15■□□□□ 0.34
PDZRN3-202ENST00000308537 FHL1Q13642 323 aa17.15■□□□□ 0.34
PDZRN3-202ENST00000308537 RAB35Q15286 201 aa17.15■□□□□ 0.34
PDZRN3-202ENST00000308537 ZNF584Q8IVC4 421 aa17.15■□□□□ 0.34
PDZRN3-202ENST00000308537 OR4F15Q8NGB8 312 aa17.15■□□□□ 0.34
PDZRN3-202ENST00000308537 NMD3Q96D46 503 aaKnown RBP17.15■□□□□ 0.34
PDZRN3-202ENST00000308537 SLC25A44Q96H78 314 aaPredicted RBP17.15■□□□□ 0.34
PDZRN3-202ENST00000308537 PRRC1Q96M27 445 aa17.15■□□□□ 0.34
PDZRN3-202ENST00000308537 NSRP1Q9H0G5 558 aaKnown RBP17.15■□□□□ 0.34
PDZRN3-202ENST00000308537 PLK3Q9H4B4 646 aa17.15■□□□□ 0.34
PDZRN3-202ENST00000308537 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.15■□□□□ 0.34
PDZRN3-202ENST00000308537 CCDC22O60826 627 aa17.14■□□□□ 0.33
PDZRN3-202ENST00000308537 OR6A2O95222 327 aa17.14■□□□□ 0.33
PDZRN3-202ENST00000308537 F13BP05160 661 aa17.14■□□□□ 0.33
PDZRN3-202ENST00000308537 ZNF35P13682 527 aa17.14■□□□□ 0.33
PDZRN3-202ENST00000308537 THBS4P35443 961 aa17.14■□□□□ 0.33
PDZRN3-202ENST00000308537 AQP2P41181 271 aa17.14■□□□□ 0.33
PDZRN3-202ENST00000308537 EFNA4P52798 201 aa17.14■□□□□ 0.33
PDZRN3-202ENST00000308537 CHRNB3Q05901 458 aa17.14■□□□□ 0.33
PDZRN3-202ENST00000308537 NPRL3Q12980 569 aa17.14■□□□□ 0.33
PDZRN3-202ENST00000308537 ARMC4Q5T2S8 1044 aa17.14■□□□□ 0.33
PDZRN3-202ENST00000308537 SPATA21Q7Z572 469 aa17.14■□□□□ 0.33
PDZRN3-202ENST00000308537 NANOGNBQ7Z5D8 188 aa17.14■□□□□ 0.33
PDZRN3-202ENST00000308537 PRIMA1Q86XR5 153 aa17.14■□□□□ 0.33
PDZRN3-202ENST00000308537 SKA3Q8IX90 412 aa17.14■□□□□ 0.33
PDZRN3-202ENST00000308537 MOSPD2Q8NHP6 518 aa17.14■□□□□ 0.33
PDZRN3-202ENST00000308537 C10orf105Q8TEF2 133 aa17.14■□□□□ 0.33
PDZRN3-202ENST00000308537 ASB10Q8WXI3 467 aa17.14■□□□□ 0.33
PDZRN3-202ENST00000308537 SGTBQ96EQ0 304 aa17.14■□□□□ 0.33
PDZRN3-202ENST00000308537 TPD52L3Q96J77 140 aa17.14■□□□□ 0.33
PDZRN3-202ENST00000308537 B3GAT2Q9NPZ5 323 aa17.14■□□□□ 0.33
PDZRN3-202ENST00000308537 POFUT2Q9Y2G5 429 aa17.14■□□□□ 0.33
PDZRN3-202ENST00000308537 B9A039 149 aa17.13■□□□□ 0.33
PDZRN3-202ENST00000308537 BLOC1S5-TXNDC5H3BN57 136 aa17.13■□□□□ 0.33
PDZRN3-202ENST00000308537 J3KTA2 159 aa17.13■□□□□ 0.33
PDZRN3-202ENST00000308537 CXCR6O00574 342 aa17.13■□□□□ 0.33
PDZRN3-202ENST00000308537 GPRIN2O60269 458 aa17.13■□□□□ 0.33
PDZRN3-202ENST00000308537 F12P00748 615 aaPredicted RBP17.13■□□□□ 0.33
PDZRN3-202ENST00000308537 DRD4P21917 467 aa17.13■□□□□ 0.33
PDZRN3-202ENST00000308537 PCSK6P29122 969 aa17.13■□□□□ 0.33
PDZRN3-202ENST00000308537 GSG1Q2KHT4 349 aa17.13■□□□□ 0.33
PDZRN3-202ENST00000308537 CBLL1Q75N03 491 aa17.13■□□□□ 0.33
PDZRN3-202ENST00000308537 OFCC1Q8IZS5 231 aa17.13■□□□□ 0.33
PDZRN3-202ENST00000308537 LRRC75AQ8NAA5 344 aa17.13■□□□□ 0.33
PDZRN3-202ENST00000308537 ZNF566Q969W8 418 aa17.13■□□□□ 0.33
PDZRN3-202ENST00000308537 ZNF347Q96SE7 839 aa17.13■□□□□ 0.33
PDZRN3-202ENST00000308537 DOK1Q99704 481 aa17.13■□□□□ 0.33
PDZRN3-202ENST00000308537 HOPXQ9BPY8 73 aaPredicted RBP17.13■□□□□ 0.33
PDZRN3-202ENST00000308537 ELAC2Q9BQ52 826 aaKnown RBP17.13■□□□□ 0.33
PDZRN3-202ENST00000308537 TMEM38BQ9NVV0 291 aa17.13■□□□□ 0.33
PDZRN3-202ENST00000308537 ADAM21Q9UKJ8 722 aa17.13■□□□□ 0.33
PDZRN3-202ENST00000308537 AP3M1Q9Y2T2 418 aa17.13■□□□□ 0.33
PDZRN3-202ENST00000308537 VWC2LB2RUY7 222 aa17.12■□□□□ 0.33
PDZRN3-202ENST00000308537 DHHO43323 396 aa17.12■□□□□ 0.33
PDZRN3-202ENST00000308537 SNX3O60493 162 aa17.12■□□□□ 0.33
PDZRN3-202ENST00000308537 BCL10O95999 233 aa17.12■□□□□ 0.33
PDZRN3-202ENST00000308537 PATE4P0C8F1 98 aa17.12■□□□□ 0.33
PDZRN3-202ENST00000308537 UMPSP11172 480 aa17.12■□□□□ 0.33
PDZRN3-202ENST00000308537 CAPZA2P47755 286 aa17.12■□□□□ 0.33
PDZRN3-202ENST00000308537 GIPRP48546 466 aa17.12■□□□□ 0.33
PDZRN3-202ENST00000308537 PIGFQ07326 219 aa17.12■□□□□ 0.33
PDZRN3-202ENST00000308537 VHLLQ6RSH7 139 aa17.12■□□□□ 0.33
PDZRN3-202ENST00000308537 PIWIL3Q7Z3Z3 882 aaKnown RBP17.12■□□□□ 0.33
PDZRN3-202ENST00000308537 NOXO1Q8NFA2 376 aa17.12■□□□□ 0.33
PDZRN3-202ENST00000308537 MCHR2Q969V1 340 aa17.12■□□□□ 0.33
PDZRN3-202ENST00000308537 KCNS3Q9BQ31 491 aa17.12■□□□□ 0.33
PDZRN3-202ENST00000308537 EFCAB1Q9HAE3 211 aa17.12■□□□□ 0.33
PDZRN3-202ENST00000308537 HIF3AQ9Y2N7 669 aa17.12■□□□□ 0.33
PDZRN3-202ENST00000308537 PMF1-BGLAPU3KQ54 211 aa17.12■□□□□ 0.33
PDZRN3-202ENST00000308537 IGKV1D-43A0A0B4J1Z2 117 aa17.11■□□□□ 0.33
PDZRN3-202ENST00000308537 NPIPB13A6NJU9 1138 aa17.11■□□□□ 0.33
PDZRN3-202ENST00000308537 NPIPB4C9JG80 1138 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms