RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 HPF1Q9NWY4 346 aa19.2■□□□□ 0.66
SOX17-201ENST00000297316 FTCDNL1E5RQL4 147 aa19.2■□□□□ 0.66
SOX17-201ENST00000297316 SC5DO75845 299 aa19.2■□□□□ 0.66
SOX17-201ENST00000297316 AZGP1P25311 298 aaKnown RBP19.2■□□□□ 0.66
SOX17-201ENST00000297316 MSX1P28360 303 aa19.2■□□□□ 0.66
SOX17-201ENST00000297316 GLYR1Q49A26 553 aaPredicted RBP19.2■□□□□ 0.66
SOX17-201ENST00000297316 OTPQ5XKR4 325 aa19.2■□□□□ 0.66
SOX17-201ENST00000297316 OR4K17Q8NGC6 315 aa19.2■□□□□ 0.66
SOX17-201ENST00000297316 GNRHR2Q96P88 292 aa19.2■□□□□ 0.66
SOX17-201ENST00000297316 SH2D2AQ9NP31 389 aa19.2■□□□□ 0.66
SOX17-201ENST00000297316 COMMD3Q9UBI1 195 aa19.2■□□□□ 0.66
SOX17-201ENST00000297316 OGG1O15527 345 aa19.19■□□□□ 0.66
SOX17-201ENST00000297316 DXOO77932 396 aaKnown RBP19.19■□□□□ 0.66
SOX17-201ENST00000297316 TFPIP10646 304 aa19.19■□□□□ 0.66
SOX17-201ENST00000297316 PSKH1P11801 424 aa19.19■□□□□ 0.66
SOX17-201ENST00000297316 ACTA2P62736 377 aa19.19■□□□□ 0.66
SOX17-201ENST00000297316 ACTG2P63267 376 aa19.19■□□□□ 0.66
SOX17-201ENST00000297316 CDK5R1Q15078 307 aa19.19■□□□□ 0.66
SOX17-201ENST00000297316 OR7A5Q15622 319 aa19.19■□□□□ 0.66
SOX17-201ENST00000297316 CARTPTQ16568 116 aa19.19■□□□□ 0.66
SOX17-201ENST00000297316 ACKR1Q16570 336 aa19.19■□□□□ 0.66
SOX17-201ENST00000297316 TIGD4Q8IY51 512 aa19.19■□□□□ 0.66
SOX17-201ENST00000297316 FADS6Q8N9I5 356 aa19.19■□□□□ 0.66
SOX17-201ENST00000297316 RNF166Q96A37 237 aaPredicted RBP19.19■□□□□ 0.66
SOX17-201ENST00000297316 UBL7Q96S82 380 aaPredicted RBP19.19■□□□□ 0.66
SOX17-201ENST00000297316 PCDHGB7Q9Y5F8 929 aa19.19■□□□□ 0.66
SOX17-201ENST00000297316 NCKAP5O14513 1909 aa19.19■□□□□ 0.66
SOX17-201ENST00000297316 HLA-DOBP13765 273 aa19.19■□□□□ 0.66
SOX17-201ENST00000297316 CD53P19397 219 aa19.19■□□□□ 0.66
SOX17-201ENST00000297316 RPS27P42677 84 aaKnown RBP19.19■□□□□ 0.66
SOX17-201ENST00000297316 CHAF1BQ13112 559 aa19.19■□□□□ 0.66
SOX17-201ENST00000297316 GPR139Q6DWJ6 353 aa19.19■□□□□ 0.66
SOX17-201ENST00000297316 CEACAM19Q7Z692 300 aa19.19■□□□□ 0.66
SOX17-201ENST00000297316 ARMC10Q8N2F6 343 aa19.19■□□□□ 0.66
SOX17-201ENST00000297316 PAQR8Q8TEZ7 354 aa19.19■□□□□ 0.66
SOX17-201ENST00000297316 THAP4Q8WY91 577 aa19.19■□□□□ 0.66
SOX17-201ENST00000297316 PSMF1Q92530 271 aa19.19■□□□□ 0.66
SOX17-201ENST00000297316 JSRP1Q96MG2 331 aaPredicted RBP19.19■□□□□ 0.66
SOX17-201ENST00000297316 FRMD6Q96NE9 622 aa19.19■□□□□ 0.66
SOX17-201ENST00000297316 KCNN2Q9H2S1 579 aa19.19■□□□□ 0.66
SOX17-201ENST00000297316 RPH3AQ9Y2J0 694 aaPredicted RBP19.19■□□□□ 0.66
SOX17-201ENST00000297316 A0A087WV48 116 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 A0A0G2JMM0 328 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 A0A1W2PPB8 328 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 A0A1W2PRS3 328 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 KIR3DP1A8MWS1 328 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 ETV2O00321 342 aaPredicted RBP19.18■□□□□ 0.66
SOX17-201ENST00000297316 PLPP3O14495 311 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 ICAM2P13598 275 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 SPNP16150 400 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 DLX5P56178 289 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 TGIF1Q15583 401 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 ZNF684Q5T5D7 378 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 SLC22A10Q63ZE4 541 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 ZNF519Q8TB69 540 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 SLC39A7Q92504 469 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 GPR87Q9BY21 358 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 ANGPTL4Q9BY76 406 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 SRRQ9GZT4 340 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 MOKQ9UQ07 419 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 CUL9Q8IWT3 2517 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 C21orf140B9A014 251 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 STMND1H3BQB6 276 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 MTNR1BP49286 362 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 GDI2P50395 445 aaKnown RBP19.18■□□□□ 0.66
SOX17-201ENST00000297316 GBX2P52951 348 aaPredicted RBP19.18■□□□□ 0.66
SOX17-201ENST00000297316 SIRPAP78324 504 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 GABREP78334 506 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 EEF1A1P5Q5VTE0 462 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 SLC16A9Q7RTY1 509 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 PXKQ7Z7A4 578 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 SMIM19Q96E16 107 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 MRGPRX4Q96LA9 322 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 FOXN4Q96NZ1 517 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 WDR76Q9H967 626 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 TRAPPC4Q9Y296 219 aa19.18■□□□□ 0.66
SOX17-201ENST00000297316 AKR7A3O95154 331 aa19.17■□□□□ 0.66
SOX17-201ENST00000297316 RENP00797 406 aa19.17■□□□□ 0.66
SOX17-201ENST00000297316 SERPINA7P05543 415 aa19.17■□□□□ 0.66
SOX17-201ENST00000297316 OR10A3P58181 314 aa19.17■□□□□ 0.66
SOX17-201ENST00000297316 RPS11P62280 158 aaKnown RBP eCLIP19.17■□□□□ 0.66
SOX17-201ENST00000297316 SNTA1Q13424 505 aa19.17■□□□□ 0.66
SOX17-201ENST00000297316 MELKQ14680 651 aa19.17■□□□□ 0.66
SOX17-201ENST00000297316 KCNJ8Q15842 424 aa19.17■□□□□ 0.66
SOX17-201ENST00000297316 BAK1Q16611 211 aa19.17■□□□□ 0.66
SOX17-201ENST00000297316 ACSM3Q53FZ2 586 aa19.17■□□□□ 0.66
SOX17-201ENST00000297316 SLC25A53Q5H9E4 307 aa19.17■□□□□ 0.66
SOX17-201ENST00000297316 ACER2Q5QJU3 275 aa19.17■□□□□ 0.66
SOX17-201ENST00000297316 DDI2Q5TDH0 399 aa19.17■□□□□ 0.66
SOX17-201ENST00000297316 PLCZ1Q86YW0 608 aa19.17■□□□□ 0.66
SOX17-201ENST00000297316 WDFY1Q8IWB7 410 aa19.17■□□□□ 0.66
SOX17-201ENST00000297316 AP3S1Q92572 193 aa19.17■□□□□ 0.66
SOX17-201ENST00000297316 THOC3Q96J01 351 aaKnown RBP19.17■□□□□ 0.66
SOX17-201ENST00000297316 PDCD1LG2Q9BQ51 273 aa19.17■□□□□ 0.66
SOX17-201ENST00000297316 PTPRBP23467 1997 aa19.17■□□□□ 0.66
SOX17-201ENST00000297316 HPGDSO60760 199 aa19.17■□□□□ 0.66
SOX17-201ENST00000297316 PTTG1O95997 202 aa19.17■□□□□ 0.66
SOX17-201ENST00000297316 RPL27P61353 136 aaKnown RBP19.17■□□□□ 0.66
SOX17-201ENST00000297316 H3F3CQ6NXT2 135 aa19.17■□□□□ 0.66
SOX17-201ENST00000297316 OR2T4Q8NH00 348 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms