RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 CENPAP49450 140 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 BLVRAP53004 296 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 MRPL28Q13084 256 aaKnown RBP8.24□□□□□ -1.09
PDPN-201ENST00000294489 ZNF79Q15937 498 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 GLYR1Q49A26 553 aaPredicted RBP8.24□□□□□ -1.09
PDPN-201ENST00000294489 IDNKQ5T6J7 187 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 STPG1Q5TH74 334 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 HBMQ6B0K9 141 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 OPN5Q6U736 354 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 DHRS13Q6UX07 377 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 PXKQ7Z7A4 578 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 TIGD4Q8IY51 512 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 PM20D2Q8IYS1 436 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 OR2M3Q8NG83 312 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 SETD6Q8TBK2 473 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 ADAMTS17Q8TE56 1095 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 PAQR8Q8TEZ7 354 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 HTRA1Q92743 480 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 NXPE2Q96DL1 559 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 SPOCK3Q9BQ16 436 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 RNF32Q9H0A6 362 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 LAMP5Q9UJQ1 280 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 EML6Q6ZMW3 1958 aa8.24□□□□□ -1.09
PDPN-201ENST00000294489 PRSS37A4D1T9 235 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 FAM47E-STBD1D6RA91 191 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 DCTN6O00399 190 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 SLC19A2O60779 497 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 AZGP1P25311 298 aaKnown RBP8.23□□□□□ -1.09
PDPN-201ENST00000294489 PLPPR5Q32ZL2 321 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 ZMAT1Q5H9K5 638 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 BICRALQ6AI39 1079 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 METAP1DQ6UB28 335 aaPredicted RBP8.23□□□□□ -1.09
PDPN-201ENST00000294489 ARSKQ6UWY0 536 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 WDSUB1Q8N9V3 476 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 MFSD8Q8NHS3 518 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 KCTD12Q96CX2 325 aaKnown RBP8.23□□□□□ -1.09
PDPN-201ENST00000294489 MRGPRX4Q96LA9 322 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 KLHL15Q96M94 604 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 INTS14Q96SY0 518 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 ZNF160Q9HCG1 818 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 FANCFQ9NPI8 374 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 SERINC1Q9NRX5 453 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 FKBP7Q9Y680 259 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 PHYHO14832 338 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 HPGDSO60760 199 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 KRT8P05787 483 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 TFPIP10646 304 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 RANBP1P43487 201 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 SCN1BQ07699 218 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 PUDPQ08623 228 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 FOXF1Q12946 379 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 PYDC2Q56P42 97 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 FAM27D1Q5T7N8 215 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 AGAP7PQ5VUJ5 663 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 IGF2-ASQ6U949 168 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 SCAIQ8N9R8 606 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 OR6N2Q8NGY6 317 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 POC1BQ8TC44 478 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 PHYHIPQ92561 330 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 TTYH2Q9BSA4 534 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 PPIL3Q9H2H8 161 aaKnown RBP8.23□□□□□ -1.09
PDPN-201ENST00000294489 WDR76Q9H967 626 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 TIGARQ9NQ88 270 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 WDFY3Q8IZQ1 3526 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 TRAV1-2A0A0B4J238 106 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 TVP23AA6NH52 213 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 HLA-DQA2P01906 255 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 IL7P13232 177 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 PSMB10P40306 273 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 SSR4P51571 173 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 RPS18P62269 152 aaKnown RBP8.23□□□□□ -1.09
PDPN-201ENST00000294489 ZP4Q12836 540 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 OR7A5Q15622 319 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 TMEM164Q5U3C3 297 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 CNIH2Q6PI25 160 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 H1FNTQ75WM6 255 aaPredicted RBP8.23□□□□□ -1.09
PDPN-201ENST00000294489 CDC20BQ86Y33 519 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 DRAXINQ8NBI3 349 aaPredicted RBP8.23□□□□□ -1.09
PDPN-201ENST00000294489 ZNF519Q8TB69 540 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 NPAS1Q99742 590 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 POTEKPQ9BYX7 375 aa8.23□□□□□ -1.09
PDPN-201ENST00000294489 NPIPB13A6NJU9 1138 aa8.22□□□□□ -1.09
PDPN-201ENST00000294489 FAM25AB3EWG3 89 aa8.22□□□□□ -1.09
PDPN-201ENST00000294489 FAM25CB3EWG5 89 aa8.22□□□□□ -1.09
PDPN-201ENST00000294489 FAM25GB3EWG6 89 aa8.22□□□□□ -1.09
PDPN-201ENST00000294489 ZNF879B4DU55 563 aa8.22□□□□□ -1.09
PDPN-201ENST00000294489 NPIPB4C9JG80 1138 aa8.22□□□□□ -1.09
PDPN-201ENST00000294489 PSMD9O00233 223 aa8.22□□□□□ -1.09
PDPN-201ENST00000294489 SERPINA7P05543 415 aa8.22□□□□□ -1.09
PDPN-201ENST00000294489 RAB3BP20337 219 aa8.22□□□□□ -1.09
PDPN-201ENST00000294489 PTBP1P26599 531 aaKnown RBP eCLIP8.22□□□□□ -1.09
PDPN-201ENST00000294489 CD82P27701 267 aa8.22□□□□□ -1.09
PDPN-201ENST00000294489 ADH6P28332 368 aa8.22□□□□□ -1.09
PDPN-201ENST00000294489 RPS15P62841 145 aaKnown RBP8.22□□□□□ -1.09
PDPN-201ENST00000294489 EGR3Q06889 387 aa8.22□□□□□ -1.09
PDPN-201ENST00000294489 SFXN4Q6P4A7 337 aa8.22□□□□□ -1.09
PDPN-201ENST00000294489 DPY19L4Q7Z388 723 aa8.22□□□□□ -1.09
PDPN-201ENST00000294489 RPS19BP1Q86WX3 136 aaKnown RBP8.22□□□□□ -1.09
PDPN-201ENST00000294489 YIPF7Q8N8F6 280 aa8.22□□□□□ -1.09
PDPN-201ENST00000294489 OR13C5Q8NGS8 318 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms