RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 PHLPP2Q6ZVD8 1323 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 GRID2IPA4D2P6 1211 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 LILRA5A6NI73 299 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 GOLGA6L10A6NI86 522 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 GABRR3A8MPY1 467 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 EFCAB9A8MZ26 197 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 IGKV5-2P06315 115 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 C1QTNF9P0C862 333 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 NQO1P15559 274 aaKnown RBP2.4□□□□□ -2.02
CHD1-201ENST00000284049 PGCP20142 388 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 PVALBP20472 110 aaPredicted RBP2.4□□□□□ -2.02
CHD1-201ENST00000284049 LEPP41159 167 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 ZNF155Q12901 538 aaPredicted RBP2.4□□□□□ -2.02
CHD1-201ENST00000284049 FOXI1Q12951 378 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 ITPK1Q13572 414 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 OR5I1Q13606 314 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 SLC17A1Q14916 467 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 H3F3CQ6NXT2 135 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 STOX1Q6ZVD7 989 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 SLC35D2Q76EJ3 337 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 GDPD3Q7L5L3 318 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 ABHD12BQ7Z5M8 362 aaPredicted RBP2.4□□□□□ -2.02
CHD1-201ENST00000284049 TRAPPC5Q8IUR0 188 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 PGAM4Q8N0Y7 254 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 OR5L2Q8NGL0 311 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 OR6K2Q8NGY2 324 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 SDR42E1Q8WUS8 393 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 SERPINB11Q96P15 392 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 PSMB7Q99436 277 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 PHB2Q99623 299 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 RBM4Q9BWF3 364 aaKnown RBP2.4□□□□□ -2.02
CHD1-201ENST00000284049 PLGRKTQ9HBL7 147 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.4□□□□□ -2.02
CHD1-201ENST00000284049 C1orf109Q9NX04 203 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 TREM2Q9NZC2 230 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 PHIPQ8WWQ0 1821 aa2.4□□□□□ -2.02
CHD1-201ENST00000284049 ELP1O95163 1332 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 VSTM2BA6NLU5 285 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 SMLR1H3BR10 107 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 RAD51BO15315 384 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 TMEM50AO95807 157 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 PEX11BO96011 259 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 CDH1P12830 882 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 ATF1P18846 271 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 GGT1P19440 569 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 TNFSF9P41273 254 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 ARHGDIAP52565 204 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 EMP2P54851 167 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 HMGCS2P54868 508 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 MLF1P58340 268 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 ERVK-16P61578 105 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 MEF2DQ14814 521 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 FAM189A2Q15884 450 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 ZNF74Q16587 644 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 TTC33Q6PID6 262 aaPredicted RBP2.4□□□□□ -2.03
CHD1-201ENST00000284049 AHSA2Q719I0 299 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 SLC26A9Q7LBE3 791 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 PTAR1Q7Z6K3 402 aaPredicted RBP2.4□□□□□ -2.03
CHD1-201ENST00000284049 FTMTQ8N4E7 242 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 FGF11Q92914 225 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 PSMG2Q969U7 264 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 CNN2Q99439 309 aaKnown RBP2.4□□□□□ -2.03
CHD1-201ENST00000284049 WDR41Q9HAD4 459 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 SIRT7Q9NRC8 400 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 SDR39U1Q9NRG7 319 aaPredicted RBP2.4□□□□□ -2.03
CHD1-201ENST00000284049 RLFQ13129 1914 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 MED23Q9ULK4 1368 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 J3KR12 359 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 IMPA2O14732 288 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 HAT1O14929 419 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 LRCH4O75427 683 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 NUDT3O95989 172 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 CRYABP02511 175 aaKnown RBP2.4□□□□□ -2.03
CHD1-201ENST00000284049 RPS17P08708 135 aaKnown RBP2.4□□□□□ -2.03
CHD1-201ENST00000284049 AK4P27144 223 aaPredicted RBP2.4□□□□□ -2.03
CHD1-201ENST00000284049 ACTR1BP42025 376 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 ZFP36L2P47974 494 aaKnown RBP2.4□□□□□ -2.03
CHD1-201ENST00000284049 RGS6P49758 472 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 RARRES1P49788 294 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 CCNHP51946 323 aaPredicted RBP2.4□□□□□ -2.03
CHD1-201ENST00000284049 OR2B8PP59922 312 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 RHOAP61586 193 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 ILKQ13418 452 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 GNA13Q14344 377 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 PTF1AQ7RTS3 328 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 BEST4Q8NFU0 473 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 OR51E1Q8TCB6 317 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 PYROXD1Q8WU10 500 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 CD101Q93033 1021 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 RAB3CQ96E17 227 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 OR51V1Q9H2C8 321 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 LIME1Q9H400 295 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 ZNF302Q9NR11 478 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 PPP1R3CQ9UQK1 317 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 STK36Q9NRP7 1315 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 IDSB3KWA1 339 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 TNFRSF13BO14836 293 aaPredicted RBP2.4□□□□□ -2.03
CHD1-201ENST00000284049 ATP6V0E1O15342 81 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 NBR2O15453 112 aa2.4□□□□□ -2.03
CHD1-201ENST00000284049 COCHO43405 550 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms