RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 IMPA2O14732 288 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 TSPAN6O43657 245 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 IFNA2P01563 188 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 BUD31P41223 144 aaPredicted RBP8.01□□□□□ -1.13
VAPB-201ENST00000265619 CSNK1EP49674 416 aaKnown RBP8.01□□□□□ -1.13
VAPB-201ENST00000265619 TAS2R20P59543 309 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 MESP2Q0VG99 397 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 AWAT1Q58HT5 328 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 PWWP2BQ6NUJ5 590 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 CHST9Q7L1S5 443 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 CYB561A3Q8NBI2 242 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 UBAC2Q8NBM4 344 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 SDR9C7Q8NEX9 313 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 OR4E2Q8NGC2 313 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 OR5T3Q8NGG3 340 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 OR2G2Q8NGZ5 317 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 XAGE5Q8WWM1 108 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 RRNAD1Q96FB5 475 aaKnown RBP8.01□□□□□ -1.13
VAPB-201ENST00000265619 C2orf88Q9BSF0 95 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 NOX4Q9NPH5 578 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 TMEM100Q9NV29 134 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 SLC23A2Q9UGH3 650 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 SLC27A6Q9Y2P4 619 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 SERTM1A2A2V5 107 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 RNASEK-C17orf49H0YIS7 233 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 TXNDC12O95881 172 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 MT-ND4LP03901 98 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 CD3DP04234 171 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 PGAM2P15259 253 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 GDI1P31150 447 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 AQP2P41181 271 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 NDUFA6P56556 154 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 RPP30P78346 268 aaKnown RBP8.01□□□□□ -1.13
VAPB-201ENST00000265619 HTRA4P83105 476 aaPredicted RBP8.01□□□□□ -1.13
VAPB-201ENST00000265619 PJVKQ0ZLH3 352 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 PDE7AQ13946 482 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 ZNF239Q16600 458 aaKnown RBP8.01□□□□□ -1.13
VAPB-201ENST00000265619 NKAPLQ5M9Q1 402 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 C1orf53Q5VUE5 145 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 ASTLQ6HA08 431 aaPredicted RBP8.01□□□□□ -1.13
VAPB-201ENST00000265619 FAM71E1Q6IPT2 247 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 C5orf24Q7Z6I8 188 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 PARGQ86W56 976 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 STOML3Q8TAV4 291 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 COL26A1Q96A83 441 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 NRTNQ99748 197 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 FN3KRPQ9HA64 309 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 APMAPQ9HDC9 416 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 GFOD1Q9NXC2 390 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 PLA2G2EQ9NZK7 142 aa8.01□□□□□ -1.13
VAPB-201ENST00000265619 LINC01565O15544 149 aa8□□□□□ -1.13
VAPB-201ENST00000265619 HOXB5P09067 269 aa8□□□□□ -1.13
VAPB-201ENST00000265619 HOXA5P20719 270 aa8□□□□□ -1.13
VAPB-201ENST00000265619 BDH1Q02338 343 aa8□□□□□ -1.13
VAPB-201ENST00000265619 FUT5Q11128 374 aa8□□□□□ -1.13
VAPB-201ENST00000265619 TSPAN31Q12999 210 aa8□□□□□ -1.13
VAPB-201ENST00000265619 RSU1Q15404 277 aa8□□□□□ -1.13
VAPB-201ENST00000265619 USF2Q15853 346 aaPredicted RBP8□□□□□ -1.13
VAPB-201ENST00000265619 CDNFQ49AH0 187 aa8□□□□□ -1.13
VAPB-201ENST00000265619 TMEM244Q5VVB8 128 aa8□□□□□ -1.13
VAPB-201ENST00000265619 FAM83HQ6ZRV2 1179 aaPredicted RBP8□□□□□ -1.13
VAPB-201ENST00000265619 NRMQ8IXM6 262 aa8□□□□□ -1.13
VAPB-201ENST00000265619 AVL9Q8NBF6 648 aa8□□□□□ -1.13
VAPB-201ENST00000265619 TMEM255BQ8WV15 326 aa8□□□□□ -1.13
VAPB-201ENST00000265619 SUSD6Q92537 303 aa8□□□□□ -1.13
VAPB-201ENST00000265619 KXD1Q9BQD3 176 aa8□□□□□ -1.13
VAPB-201ENST00000265619 GPR174Q9BXC1 333 aa8□□□□□ -1.13
VAPB-201ENST00000265619 EXO5Q9H790 373 aa8□□□□□ -1.13
VAPB-201ENST00000265619 MMP26Q9NRE1 261 aa8□□□□□ -1.13
VAPB-201ENST00000265619 CYTL1Q9NRR1 136 aa8□□□□□ -1.13
VAPB-201ENST00000265619 SLC25A13Q9UJS0 675 aa8□□□□□ -1.13
VAPB-201ENST00000265619 KCNE3Q9Y6H6 103 aa8□□□□□ -1.13
VAPB-201ENST00000265619 LOC100509620A0A075B734 347 aa8□□□□□ -1.13
VAPB-201ENST00000265619 C7orf77A4D0Y5 90 aa8□□□□□ -1.13
VAPB-201ENST00000265619 TBC1D3BA6NDS4 549 aa8□□□□□ -1.13
VAPB-201ENST00000265619 CHRM4P08173 479 aa8□□□□□ -1.13
VAPB-201ENST00000265619 OR4E1P0C645 316 aa8□□□□□ -1.13
VAPB-201ENST00000265619 C1GALT1C1LP0DN25 315 aa8□□□□□ -1.13
VAPB-201ENST00000265619 ALPPL2P10696 532 aa8□□□□□ -1.13
VAPB-201ENST00000265619 ITPKBP27987 946 aa8□□□□□ -1.13
VAPB-201ENST00000265619 LPAR6P43657 344 aa8□□□□□ -1.13
VAPB-201ENST00000265619 EFNB2P52799 333 aa8□□□□□ -1.13
VAPB-201ENST00000265619 NUTF2P61970 127 aaKnown RBP8□□□□□ -1.13
VAPB-201ENST00000265619 DHCR24Q15392 516 aa8□□□□□ -1.13
VAPB-201ENST00000265619 OR4K14Q8NGD5 310 aa8□□□□□ -1.13
VAPB-201ENST00000265619 OR51L1Q8NGJ5 315 aa8□□□□□ -1.13
VAPB-201ENST00000265619 ROBO4Q8WZ75 1007 aa8□□□□□ -1.13
VAPB-201ENST00000265619 NDC1Q9BTX1 674 aa8□□□□□ -1.13
VAPB-201ENST00000265619 GPR61Q9BZJ8 451 aa8□□□□□ -1.13
VAPB-201ENST00000265619 PARP12Q9H0J9 701 aaKnown RBP8□□□□□ -1.13
VAPB-201ENST00000265619 A4GALTQ9NPC4 353 aa8□□□□□ -1.13
VAPB-201ENST00000265619 STEAP1Q9UHE8 339 aa8□□□□□ -1.13
VAPB-201ENST00000265619 MSGN1A6NI15 193 aa8□□□□□ -1.13
VAPB-201ENST00000265619 CD8AP01732 235 aa8□□□□□ -1.13
VAPB-201ENST00000265619 MT-ND5P03915 603 aa8□□□□□ -1.13
VAPB-201ENST00000265619 SOD3P08294 240 aa8□□□□□ -1.13
VAPB-201ENST00000265619 ADRB3P13945 408 aa8□□□□□ -1.13
VAPB-201ENST00000265619 RBM34P42696 430 aaKnown RBP8□□□□□ -1.13
VAPB-201ENST00000265619 GSK3AP49840 483 aa8□□□□□ -1.13
VAPB-201ENST00000265619 ZNF234Q14588 700 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms