RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 RLN2P04090 185 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 RAB40ALP0C0E4 278 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 SMIM10L1P0DMW3 83 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 APEHP13798 732 aaKnown RBP11.28□□□□□ -0.6
CHMP3-201ENST00000263856 ZP3P21754 424 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 GMFBP60983 142 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 ARMC6Q6NXE6 501 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 TSSK4Q6SA08 328 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 PDZD9Q8IXQ8 264 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 OR2AK2Q8NG84 335 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 RAB40AQ8WXH6 277 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 HERVK_113Q902F9 699 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 RSC1A1Q92681 617 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 TM4SF19Q96DZ7 209 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 SMIM10Q96HG1 83 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 DGAT2Q96PD7 388 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 ARPC5LQ9BPX5 153 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 TMEM185BQ9H7F4 350 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 KCNG2Q9UJ96 466 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 DCDC2BA2VCK2 349 aa11.27□□□□□ -0.6
CHMP3-201ENST00000263856 OIP5O43482 229 aa11.27□□□□□ -0.6
CHMP3-201ENST00000263856 AKR7A3O95154 331 aa11.27□□□□□ -0.6
CHMP3-201ENST00000263856 OR6A2O95222 327 aa11.27□□□□□ -0.6
CHMP3-201ENST00000263856 SPARCP09486 303 aa11.27□□□□□ -0.6
CHMP3-201ENST00000263856 ST6GAL1P15907 406 aa11.27□□□□□ -0.6
CHMP3-201ENST00000263856 COL9A1P20849 921 aa11.27□□□□□ -0.6
CHMP3-201ENST00000263856 CAPZA2P47755 286 aa11.27□□□□□ -0.6
CHMP3-201ENST00000263856 STARP49675 285 aa11.27□□□□□ -0.6
CHMP3-201ENST00000263856 AKR1C2P52895 323 aa11.27□□□□□ -0.6
CHMP3-201ENST00000263856 AKR1C1Q04828 323 aa11.27□□□□□ -0.6
CHMP3-201ENST00000263856 ILF3Q12906 894 aaKnown RBP eCLIP11.27□□□□□ -0.65e-7■■■■□ 23.6
CHMP3-201ENST00000263856 BIKQ13323 160 aa11.27□□□□□ -0.6
CHMP3-201ENST00000263856 TMEM196Q5HYL7 178 aa11.27□□□□□ -0.6
CHMP3-201ENST00000263856 PRSS58Q8IYP2 241 aa11.27□□□□□ -0.6
CHMP3-201ENST00000263856 PM20D2Q8IYS1 436 aa11.27□□□□□ -0.6
CHMP3-201ENST00000263856 MARVELD3Q96A59 401 aa11.27□□□□□ -0.6
CHMP3-201ENST00000263856 C3orf49Q96BT1 292 aa11.27□□□□□ -0.6
CHMP3-201ENST00000263856 DMRTA2Q96SC8 542 aa11.27□□□□□ -0.6
CHMP3-201ENST00000263856 AMELYQ99218 206 aa11.27□□□□□ -0.6
CHMP3-201ENST00000263856 KIF25Q9UIL4 384 aa11.27□□□□□ -0.6
CHMP3-201ENST00000263856 ICAM5Q9UMF0 924 aa11.27□□□□□ -0.6
CHMP3-201ENST00000263856 KIF26BQ2KJY2 2108 aa11.27□□□□□ -0.61
CHMP3-201ENST00000263856 SLC22A23A1A5C7 686 aa11.27□□□□□ -0.61
CHMP3-201ENST00000263856 C2orf74A8MZ97 194 aa11.27□□□□□ -0.61
CHMP3-201ENST00000263856 GLSO94925 669 aaPredicted RBP11.27□□□□□ -0.61
CHMP3-201ENST00000263856 KLF8O95600 359 aaPredicted RBP11.27□□□□□ -0.61
CHMP3-201ENST00000263856 EGFP01133 1207 aa11.27□□□□□ -0.61
CHMP3-201ENST00000263856 HIST1H2ABP04908 130 aa11.27□□□□□ -0.61
CHMP3-201ENST00000263856 PPP3CBP16298 524 aa11.27□□□□□ -0.61
CHMP3-201ENST00000263856 RBM34P42696 430 aaKnown RBP11.27□□□□□ -0.61
CHMP3-201ENST00000263856 TAF13Q15543 124 aa11.27□□□□□ -0.61
CHMP3-201ENST00000263856 ATRAIDQ6UW56 229 aa11.27□□□□□ -0.61
CHMP3-201ENST00000263856 HIST3H2AQ7L7L0 130 aa11.27□□□□□ -0.61
CHMP3-201ENST00000263856 TAF8Q7Z7C8 310 aa11.27□□□□□ -0.61
CHMP3-201ENST00000263856 SCARB1Q8WTV0 552 aa11.27□□□□□ -0.61
CHMP3-201ENST00000263856 HIST1H2ACQ93077 130 aa11.27□□□□□ -0.61
CHMP3-201ENST00000263856 KLHL15Q96M94 604 aa11.27□□□□□ -0.61
CHMP3-201ENST00000263856 KLHDC3Q9BQ90 382 aa11.27□□□□□ -0.61
CHMP3-201ENST00000263856 LYRM4Q9HD34 91 aa11.27□□□□□ -0.61
CHMP3-201ENST00000263856 CGGBP1Q9UFW8 167 aaPredicted RBP11.27□□□□□ -0.61
CHMP3-201ENST00000263856 FREM3P0C091 2139 aa11.27□□□□□ -0.61
CHMP3-201ENST00000263856 A0A087WUJ7 227 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 SERINC4A6NH21 518 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 PLRG1O43660 514 aaKnown RBP11.26□□□□□ -0.61
CHMP3-201ENST00000263856 CA3P07451 260 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 MAPK3P27361 379 aaPredicted RBP11.26□□□□□ -0.61
CHMP3-201ENST00000263856 PRMT2P55345 433 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 GPM6BQ13491 265 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 ELFN2Q5R3F8 820 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 PARM1Q6UWI2 310 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 UNQ9370/PRO34162Q6UXP9 181 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 C16orf52Q8NHV5 167 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 FGF14Q92915 247 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 POFUT1Q9H488 388 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 CPNE7Q9UBL6 633 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 MFSD2BA6NFX1 497 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 B4DGG1 531 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 TGFBR3LH3BV60 316 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 AMY2AP04746 511 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 MAP3K8P41279 467 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 NFATC4Q14934 902 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 CD226Q15762 336 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 LINC01590Q5TEZ4 76 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 RGS7BPQ6MZT1 257 aaPredicted RBP11.26□□□□□ -0.61
CHMP3-201ENST00000263856 TMEM205Q6UW68 189 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 CD163Q86VB7 1156 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 SPICQ8N5J4 248 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 JAGN1Q8N5M9 183 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 FLVCR1-AS1Q8TAF5 88 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 REG4Q9BYZ8 158 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 B3GNT4Q9C0J1 378 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 NRSN2Q9GZP1 204 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 PLEKHA1Q9HB21 404 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 PNO1Q9NRX1 252 aaKnown RBP11.26□□□□□ -0.61
CHMP3-201ENST00000263856 PLEKHA6Q9Y2H5 1048 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 NOP16Q9Y3C1 178 aaKnown RBP11.26□□□□□ -0.61
CHMP3-201ENST00000263856 RP1P56715 2156 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 KCNAB3O43448 404 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 SDC3O75056 442 aa11.26□□□□□ -0.61
CHMP3-201ENST00000263856 GABRA1P14867 456 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms