RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 TSSK4Q6SA08 328 aa9.85□□□□□ -0.83
CHRNA1-201ENST00000261007 Q6ZS52 159 aa9.85□□□□□ -0.83
CHRNA1-201ENST00000261007 RAB11FIP2Q7L804 512 aa9.85□□□□□ -0.83
CHRNA1-201ENST00000261007 SSX6Q7RTT6 188 aa9.85□□□□□ -0.83
CHRNA1-201ENST00000261007 KRT77Q7Z794 578 aa9.85□□□□□ -0.83
CHRNA1-201ENST00000261007 BPIFCQ8NFQ6 507 aa9.85□□□□□ -0.83
CHRNA1-201ENST00000261007 CADM4Q8NFZ8 388 aa9.85□□□□□ -0.83
CHRNA1-201ENST00000261007 SYNPRQ8TBG9 265 aa9.85□□□□□ -0.83
CHRNA1-201ENST00000261007 RPS4Y2Q8TD47 263 aa9.85□□□□□ -0.83
CHRNA1-201ENST00000261007 MIB2Q96AX9 1013 aa9.85□□□□□ -0.83
CHRNA1-201ENST00000261007 ANKRD9Q96BM1 317 aaPredicted RBP9.85□□□□□ -0.83
CHRNA1-201ENST00000261007 PHYHIPLQ96FC7 376 aa9.85□□□□□ -0.83
CHRNA1-201ENST00000261007 OR14A2Q96R54 314 aa9.85□□□□□ -0.83
CHRNA1-201ENST00000261007 GFI1Q99684 422 aa9.85□□□□□ -0.83
CHRNA1-201ENST00000261007 ZNF559Q9BR84 538 aa9.85□□□□□ -0.83
CHRNA1-201ENST00000261007 LMF2Q9BU23 707 aaKnown RBP9.85□□□□□ -0.83
CHRNA1-201ENST00000261007 ALX4Q9H161 411 aaPredicted RBP9.85□□□□□ -0.83
CHRNA1-201ENST00000261007 PIGMQ9H3S5 423 aa9.85□□□□□ -0.83
CHRNA1-201ENST00000261007 BIN3Q9NQY0 253 aa9.85□□□□□ -0.83
CHRNA1-201ENST00000261007 ICAM5Q9UMF0 924 aa9.85□□□□□ -0.83
CHRNA1-201ENST00000261007 V9GY05 133 aa9.85□□□□□ -0.83
CHRNA1-201ENST00000261007 ARPC4-TTLL3A0A0A6YYG9 625 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 RAB19A4D1S5 217 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 B4DGG1 531 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 CTNSO60931 367 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 ATG12O94817 140 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 LYPD3O95274 346 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 SIX6O95475 246 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 NME1P15531 152 aaKnown RBP9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 ST6GAL1P15907 406 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 CNR1P21554 472 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 DCTDP32321 178 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 SCAND1P57086 179 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 GPR85P60893 370 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 MGAT2Q10469 447 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 STX4Q12846 297 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 HFEQ30201 348 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 NDUFAF6Q330K2 333 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 TP53I3Q53FA7 332 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 MRPL2Q5T653 305 aaKnown RBP9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 HES5Q5TA89 166 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 LRRN1Q6UXK5 716 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 PGAP1Q75T13 922 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 PRSS41Q7RTY9 318 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 GLB1L2Q8IW92 636 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 ARHGEF39Q8N4T4 335 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 OR6N1Q8NGY5 312 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 OIT3Q8WWZ8 545 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 PEX11GQ96HA9 241 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 SEMA4CQ9C0C4 833 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 TMEM27Q9HBJ8 222 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 NOX4Q9NPH5 578 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 MRTO4Q9UKD2 239 aaKnown RBP9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 SCN3AQ9NY46 2000 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 TRANK1O15050 2925 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 METTL12A8MUP2 240 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 GOSR2O14653 212 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 PIN1P1O15428 100 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 ZNF254O75437 659 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 RDH16O75452 317 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 RBBP9O75884 186 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 SPDEFO95238 335 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 NSA2O95478 260 aaKnown RBP9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 IGF2P01344 180 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 GP1BAP07359 652 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 CELA2BP08218 269 aaPredicted RBP9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 CSF1P09603 554 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 EDNRAP25101 427 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 CD38P28907 300 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 NOS3P29474 1203 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 GALNSP34059 522 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 GABRA3P34903 492 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 RPL35P42766 123 aaKnown RBP9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 CAPZBP47756 277 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 RAB13P51153 203 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 TAS2R20P59543 309 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 SNRPNP63162 240 aaKnown RBP9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 IGLV3-21P80748 117 aaPredicted RBP9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 ID2Q02363 134 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 CRMP1Q14194 572 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 ZNF542PQ5EBM4 170 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 ARHGAP11AQ6P4F7 1023 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 THSD4Q6ZMP0 1018 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 ARMC10Q8N2F6 343 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 OR5T3Q8NGG3 340 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 OR52B4Q8NGK2 314 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 EDAQ92838 391 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 GCDHQ92947 438 aaPredicted RBP9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 LMAN1LQ9HAT1 526 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 OR5V1Q9UGF6 321 aa9.84□□□□□ -0.83
CHRNA1-201ENST00000261007 H7C417 338 aa9.83□□□□□ -0.84
CHRNA1-201ENST00000261007 DNAJB6O75190 326 aa9.83□□□□□ -0.84
CHRNA1-201ENST00000261007 GLSO94925 669 aaPredicted RBP9.83□□□□□ -0.84
CHRNA1-201ENST00000261007 IFNA4P05014 189 aa9.83□□□□□ -0.84
CHRNA1-201ENST00000261007 MELTFP08582 738 aa9.83□□□□□ -0.84
CHRNA1-201ENST00000261007 NAT2P11245 290 aa9.83□□□□□ -0.84
CHRNA1-201ENST00000261007 IGFBP4P22692 258 aa9.83□□□□□ -0.84
CHRNA1-201ENST00000261007 CDK2P24941 298 aa9.83□□□□□ -0.84
CHRNA1-201ENST00000261007 RBM34P42696 430 aaKnown RBP9.83□□□□□ -0.84
CHRNA1-201ENST00000261007 STARP49675 285 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms