RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 EGR3Q06889 387 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 TCF15Q12870 199 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 SKP2Q13309 424 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 KCNAB1Q14722 419 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 ST3GAL2Q16842 350 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 ESCO2Q56NI9 601 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 ALG10Q5BKT4 473 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 ZNF574Q6ZN55 896 aaPredicted RBP22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 SYT9Q86SS6 491 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 D2HGDHQ8N465 521 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 PRSS33Q8NF86 280 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 RNF166Q96A37 237 aaPredicted RBP22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 MIB2Q96AX9 1013 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 HAVCR1Q96D42 359 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 SLC25A38Q96DW6 304 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 UTP23Q9BRU9 249 aaKnown RBP22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 RBCK1Q9BYM8 510 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 ZNF768Q9H5H4 540 aaKnown RBP22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 TCF7L1Q9HCS4 588 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 MMP25Q9NPA2 562 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 ANKRD10Q9NXR5 420 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 MMACHCQ9Y4U1 282 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 ASXL3Q9C0F0 2248 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 SCDO00767 359 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 MT-ND4P03905 459 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 CLPSP04118 112 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 HPGDP15428 266 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 CFPP27918 469 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 CCR6P51684 374 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 CAMK2DQ13557 499 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 TEX261Q6UWH6 196 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 CDC20BQ86Y33 519 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 OR8H1Q8NGG4 311 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 OR5AK2Q8NH90 309 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 MAP6Q96JE9 813 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 Q96M85 177 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 ADAD1Q96M93 576 aaKnown RBP22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 SLC46A1Q96NT5 459 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 SORCS2Q96PQ0 1159 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 U3KQ87 197 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 RP1P56715 2156 aa22.59■■□□□ 1.21
RUNDC3A-201ENST00000225441 GPR179Q6PRD1 2367 aa22.58■■□□□ 1.21
RUNDC3A-201ENST00000225441 ACOT7O00154 380 aa22.58■■□□□ 1.21
RUNDC3A-201ENST00000225441 UPK3AO75631 287 aa22.58■■□□□ 1.21
RUNDC3A-201ENST00000225441 C4BPBP20851 252 aa22.58■■□□□ 1.21
RUNDC3A-201ENST00000225441 AQP2P41181 271 aa22.58■■□□□ 1.21
RUNDC3A-201ENST00000225441 ART1P52961 327 aa22.58■■□□□ 1.21
RUNDC3A-201ENST00000225441 P2RX3P56373 397 aa22.58■■□□□ 1.21
RUNDC3A-201ENST00000225441 NANOS3P60323 173 aaKnown RBP22.58■■□□□ 1.21
RUNDC3A-201ENST00000225441 BTG2P78543 158 aa22.58■■□□□ 1.21
RUNDC3A-201ENST00000225441 NDUFAF6Q330K2 333 aa22.58■■□□□ 1.21
RUNDC3A-201ENST00000225441 PWWP2BQ6NUJ5 590 aa22.58■■□□□ 1.21
RUNDC3A-201ENST00000225441 SEZ6L2Q6UXD5 910 aa22.58■■□□□ 1.21
RUNDC3A-201ENST00000225441 DNM1P46Q6ZS02 220 aa22.58■■□□□ 1.21
RUNDC3A-201ENST00000225441 TIGD4Q8IY51 512 aa22.58■■□□□ 1.21
RUNDC3A-201ENST00000225441 RGP1Q92546 391 aaPredicted RBP22.58■■□□□ 1.21
RUNDC3A-201ENST00000225441 DPYSL5Q9BPU6 564 aa22.58■■□□□ 1.21
RUNDC3A-201ENST00000225441 LRFN3Q9BTN0 628 aa22.58■■□□□ 1.21
RUNDC3A-201ENST00000225441 FITM1A5D6W6 292 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 ZNF264O43296 627 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 SSNA1O43805 119 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 SLC22A5O76082 557 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 CENPAP49450 140 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 MECP2P51608 486 aaKnown RBP22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 PGDP52209 483 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 CTXN1P60606 82 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 HES5Q5TA89 166 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 STAC2Q6ZMT1 411 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 ZSCAN1Q8NBB4 408 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 ZNF417Q8TAU3 575 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 ZPLD1Q8TCW7 415 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 KLHL15Q96M94 604 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 PRRX2Q99811 253 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 LAT2Q9GZY6 243 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 DLL4Q9NR61 685 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 FOXJ3Q9UPW0 622 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 ANKRD20A5PA0PJZ0 165 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 CDX4O14627 284 aaPredicted RBP22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 ABHD16AO95870 558 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 RENP00797 406 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 FCRLAQ7L513 359 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 PRSS45Q7RTY3 260 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 PIAS4Q8N2W9 510 aaPredicted RBP22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 SPICQ8N5J4 248 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 LSM14AQ8ND56 463 aaKnown RBP22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 RHBDD1Q8TEB9 315 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 FKRPQ9H9S5 495 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 LIN7BQ9HAP6 207 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 GRHPRQ9UBQ7 328 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 AUP1Q9Y679 476 aa22.57■■□□□ 1.2
RUNDC3A-201ENST00000225441 NUP210LQ5VU65 1888 aa22.56■■□□□ 1.2
RUNDC3A-201ENST00000225441 TMEM212A6NML5 194 aa22.56■■□□□ 1.2
RUNDC3A-201ENST00000225441 BLOC1S5-TXNDC5H3BN57 136 aa22.56■■□□□ 1.2
RUNDC3A-201ENST00000225441 IL5P05113 134 aa22.56■■□□□ 1.2
RUNDC3A-201ENST00000225441 CXCL3P19876 107 aa22.56■■□□□ 1.2
RUNDC3A-201ENST00000225441 PTH2RP49190 550 aa22.56■■□□□ 1.2
RUNDC3A-201ENST00000225441 DCAF7P61962 342 aa22.56■■□□□ 1.2
RUNDC3A-201ENST00000225441 CAMK2BQ13554 666 aa22.56■■□□□ 1.2
RUNDC3A-201ENST00000225441 ESPNLQ6ZVH7 1005 aa22.56■■□□□ 1.2
RUNDC3A-201ENST00000225441 C10orf53Q8N6V4 93 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms