RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 ACSM3Q53FZ2 586 aa12.86□□□□□ -0.35
RTFDC1-201ENST00000023939 CEACAM19Q7Z692 300 aa12.86□□□□□ -0.35
RTFDC1-201ENST00000023939 GLRX5Q86SX6 157 aa12.86□□□□□ -0.35
RTFDC1-201ENST00000023939 TMEM156Q8N614 296 aa12.86□□□□□ -0.35
RTFDC1-201ENST00000023939 ACOT12Q8WYK0 555 aa12.86□□□□□ -0.35
RTFDC1-201ENST00000023939 RNF166Q96A37 237 aaPredicted RBP12.86□□□□□ -0.35
RTFDC1-201ENST00000023939 DNAJA3Q96EY1 480 aa12.86□□□□□ -0.35
RTFDC1-201ENST00000023939 TMEM41AQ96HV5 264 aa12.86□□□□□ -0.35
RTFDC1-201ENST00000023939 RNF32Q9H0A6 362 aa12.86□□□□□ -0.35
RTFDC1-201ENST00000023939 MIXL1Q9H2W2 232 aa12.86□□□□□ -0.35
RTFDC1-201ENST00000023939 HPF1Q9NWY4 346 aa12.86□□□□□ -0.35
RTFDC1-201ENST00000023939 FOXJ2Q9P0K8 574 aa12.86□□□□□ -0.35
RTFDC1-201ENST00000023939 HDGFL3Q9Y3E1 203 aa12.86□□□□□ -0.35
RTFDC1-201ENST00000023939 V9GYH0 126 aa12.86□□□□□ -0.35
RTFDC1-201ENST00000023939 TRAV1-2A0A0B4J238 106 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 MAGEB4O15481 346 aaPredicted RBP12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 RGS5O15539 181 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 CCL3P10147 92 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 LIFP15018 202 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 RPS18P62269 152 aaKnown RBP12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 RPS11P62280 158 aaKnown RBP eCLIP12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 PPP3R1P63098 170 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 HSF1Q00613 529 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 Q0VFX4 171 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 DNASE1L3Q13609 305 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 CSRP2Q16527 193 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 PRAMEF20Q5VT98 475 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 UNQ9370/PRO34162Q6UXP9 181 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 PIP4P1Q86T03 277 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 LYSMD2Q8IV50 215 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 LAX1Q8IWV1 398 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 OTOSQ8NHW6 89 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 KCTD12Q96CX2 325 aaKnown RBP12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 ADAD1Q96M93 576 aaKnown RBP12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 ATF6BQ99941 703 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 TSPAN10Q9H1Z9 355 aaPredicted RBP12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 PPIL3Q9H2H8 161 aaKnown RBP12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 ABCB9Q9NP78 766 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 KLHL13Q9P2N7 655 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 MRM2Q9UI43 246 aaKnown RBP12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 RPH3AQ9Y2J0 694 aaPredicted RBP12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 KLHDC2Q9Y2U9 406 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 MUC3AQ02505 3323 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 TRBV2A0A0J9YWF9 115 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 LOC102725191A0A1B0GVB3 256 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 TVP23AA6NH52 213 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 SHISA8B8ZZ34 492 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 NPIPA5E9PKD4 350 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 DVL2O14641 736 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 UPK3AO75631 287 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 HLA-DOBP13765 273 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 TGM1P22735 817 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 MYL9P24844 172 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 EDNRAP25101 427 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 PTGS2P35354 604 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 CLDN6P56747 220 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 GLYR1Q49A26 553 aaPredicted RBP12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 ZMAT1Q5H9K5 638 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 TIGD3Q6B0B8 471 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 MZT2AQ6P582 158 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 DNM1P34Q6PK57 102 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 SLC35D2Q76EJ3 337 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 FAM220AQ7Z4H9 259 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 ASB17Q8WXJ9 295 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 KIAA1143Q96AT1 154 aaPredicted RBP12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 KCNK17Q96T54 332 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 SDHCQ99643 169 aaPredicted RBP12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 TTTY10Q9BZA0 68 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 SACM1LQ9NTJ5 587 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 P4HTMQ9NXG6 502 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 B3GAT1Q9P2W7 334 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 DAPK2Q9UIK4 370 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 LAMP5Q9UJQ1 280 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 NPIPA1Q9UND3 350 aa12.85□□□□□ -0.35
RTFDC1-201ENST00000023939 RALGAPA1Q6GYQ0 2036 aa12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 ARPC4-TTLL3A0A0A6YYG9 625 aa12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 H3BML4 177 aa12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 TBX1O43435 398 aa12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 SLC16A7O60669 478 aa12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 LRP3O75074 770 aa12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 ARL6IP5O75915 188 aa12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 KRT8P05787 483 aa12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 UCHL1P09936 223 aa12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 OCM2P0CE71 109 aa12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 OCMP0CE72 109 aaPredicted RBP12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 IFNGR1P15260 489 aa12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 CTLA4P16410 223 aa12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 SHC1P29353 583 aa12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 P2RY4P51582 365 aa12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 DSCR4P56555 118 aaPredicted RBP12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 SPEM2Q0P670 501 aa12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 ATP1A4Q13733 1029 aa12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 TRIM16LQ309B1 348 aa12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 C11orf91Q3C1V1 193 aa12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 HBMQ6B0K9 141 aa12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 SNX29P2Q8IUI4 249 aa12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 ZNF454Q8N9F8 522 aa12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 NLGN4YQ8NFZ3 816 aaPredicted RBP12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 OR6N2Q8NGY6 317 aa12.84□□□□□ -0.35
RTFDC1-201ENST00000023939 TTYH2Q9BSA4 534 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms