RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Thoc3Q8VE80 351 aa19.15■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Olfr536Q8VFE9 307 aa19.15■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Olfr828Q8VFM8 312 aa19.15■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Olfr170Q8VGL6 313 aa19.15■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Rab40bQ8VHP8 278 aa19.15■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Upk3bl1Q9D701 249 aa19.15■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 C1ql3Q9ESN4 255 aa19.15■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Mecp2Q9Z2D6 484 aaKnown RBP19.15■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Ranbp2Q9ERU9 3053 aaKnown RBP19.15■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Trav8n-2A0A075B633 112 aa19.14■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Gm9920D3YVZ2 140 aa19.14■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Capns1O88456 269 aa19.14■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Acvr2aP27038 513 aa19.14■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 DckP43346 260 aa19.14■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Rad52P43352 420 aa19.14■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Nxpe2Q3U095 558 aa19.14■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Klhl21Q3U410 597 aa19.14■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Cmpk2Q3U5Q7 447 aa19.14■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Znf182Q6P560 627 aa19.14■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Olfr1229Q7TQZ9 311 aa19.14■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 RfkQ8CFV9 155 aa19.14■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Nudt6Q8CH40 313 aa19.14■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Olfr1387Q8VFA9 311 aa19.14■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Olfr444Q8VFS6 310 aa19.14■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Olfr820Q8VFU5 312 aa19.14■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Fgfrl1Q91V87 529 aa19.14■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Fn3kQ9ER35 309 aa19.14■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Ndel1Q9ERR1 345 aa19.14■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Nfkb2Q9WTK5 899 aa19.14■□□□□ 0.66
Ccdc88a-202ENSMUST00000109477 Olfr1025-ps1A0A140T8K3 312 aa19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Igkv6-14A0A140T8P1 115 aa19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Gm3752A6NAT4 150 aa19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Bbip1J3QMK2 67 aa19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Gm3755K7N743 167 aa19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Ntn1O09118 604 aa19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 C2cd4dP0CG09 341 aa19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Ubl4aP21126 157 aaKnown RBP19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Clec10aP49300 304 aa19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Ccr1l1P51676 356 aa19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Cldn18P56857 264 aa19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Crmp1P97427 572 aa19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Vmn1r11Q3SXA2 299 aa19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Ankrd53Q3V0J4 497 aa19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Hephl1Q3V1H3 1159 aa19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Zfp975Q6NVD6 525 aa19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Naa50Q6PGB6 169 aaKnown RBP19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Zfp748Q7TPL6 888 aa19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Olfr1349Q7TQV1 317 aa19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Supv3l1Q80YD1 779 aaKnown RBP19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Spata2lQ8BNN1 426 aa19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Lrfn5Q8BXA0 719 aa19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Fbxw14Q8C2Y5 466 aa19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Mcfd2Q8K5B2 145 aa19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Ttc4Q8R3H9 386 aa19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Cdca3Q99M54 266 aa19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Tmem9Q9CR23 183 aa19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Wnt16Q9QYS1 364 aa19.14■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Dcaf10A2AKB9 566 aa19.13■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 PtprhE9Q0N2 971 aa19.13■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Cyp4a31F8WGU9 509 aa19.13■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 P01680 129 aa19.13■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Gpr52P0C5J4 361 aa19.13■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Hsd3b2P26149 373 aa19.13■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Pcbp4P57724 403 aaKnown RBP19.13■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Zfp39Q02525 718 aa19.13■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Tigd2Q0VBL1 525 aa19.13■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Jsrp1Q3MI48 332 aa19.13■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Secisbp2Q3U1C4 858 aaKnown RBP19.13■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Arhgef39Q66JY6 344 aa19.13■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Olfr884Q7TRE1 309 aa19.13■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Pamr1Q8BU25 720 aa19.13■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Cox10Q8CFY5 443 aa19.13■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 ShfQ8CG80 238 aa19.13■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Olfr1395Q8VGD7 317 aa19.13■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Fgf20Q9ESL9 211 aa19.13■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Klhl1Q9JI74 751 aa19.13■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Prr12E9PYL2 2035 aaKnown RBP19.13■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Ggta1l1A2AUQ7 319 aa19.12■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Rnf217D3YYI7 515 aa19.12■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 9330182O14RikJ3QNB2 140 aa19.12■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Mst1P26928 716 aa19.12■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Elk4P41158 430 aa19.12■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Pax7P47239 503 aa19.12■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 BC030870Q3V2G4 71 aa19.12■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Gm525Q3V3I5 90 aa19.12■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Snap91Q61548 901 aa19.12■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Ptp4a1Q63739 173 aa19.12■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Olfr885Q7TRE0 309 aa19.12■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 NanogQ80Z64 305 aa19.12■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 TecrlQ8BFZ1 361 aa19.12■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Cd276Q8VE98 316 aa19.12■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Vmn1r43Q8VIC9 329 aa19.12■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Ddx28Q9CWT6 540 aaKnown RBP19.12■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Slc48a1Q9D8M3 146 aa19.12■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Tspan32Q9JHH2 256 aa19.12■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Wscd2D4PHA7 571 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Fam53aE9PV82 402 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Olfr592E9PYB3 312 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Zfp108E9Q8I5 642 aa19.11■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Olfr519K7N645 319 aa19.11■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms