RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 5830473C10RikF8VQ07 620 aa10.63□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Prdx6O08709 224 aaKnown RBP10.63□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Pip5k1cO70161 661 aa10.63□□□□□ -0.71
Col9a1-202ENSMUST00000088349 IapP24822 559 aa10.63□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Adamts15P59384 950 aa10.63□□□□□ -0.71
Col9a1-202ENSMUST00000088349 UradQ283N4 178 aa10.63□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Taar7dQ5QD10 358 aa10.63□□□□□ -0.71
Col9a1-202ENSMUST00000088349 RgmaQ6PCX7 454 aa10.63□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Lrit2Q6PFC5 549 aa10.63□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Npr2Q6VVW5 1047 aa10.63□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Slc30a8Q8BGG0 367 aa10.63□□□□□ -0.71
Col9a1-202ENSMUST00000088349 SynprQ8BGN8 265 aa10.63□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Fbxo9Q8BK06 437 aa10.63□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Masp2Q91WP0 685 aa10.63□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Tpra1Q99MU1 369 aa10.63□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Slc15a1Q9JIP7 709 aa10.63□□□□□ -0.71
Col9a1-202ENSMUST00000088349 5430401F13RikE9Q328 175 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Olfr550E9Q544 316 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Rarres1F6ZIS7 283 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Sstr5O08858 362 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Prl4a1O35256 227 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 P01851 173 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 P01852 173 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Mapk14P47811 360 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 BglapP86546 95 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Bglap2P86547 95 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Mfsd12Q3U481 476 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Gcnt7Q3V3K7 433 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Lcn12Q6JVL5 193 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Rrm2bQ6PEE3 351 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 D11Wsu47eQ6PIX9 558 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Hsh2dQ6VYH9 334 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Kcmf1Q80UY2 381 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Pamr1Q8BU25 720 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Tmem222Q8BVA2 208 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Spata33Q8C624 132 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Pxdc1Q8JZU6 231 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Lin28aQ8K3Y3 209 aaKnown RBP10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Acss1Q99NB1 682 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Nqo2Q9JI75 231 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Dnajb8Q9QYI7 227 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Bpnt1Q9Z0S1 308 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Igkv12-38A0A0G2JEI7 115 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Igkv15-103A0A140T8P3 115 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Pramef6A2A8M8 474 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Fam83cA2ARK0 776 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Olfr1255A2AUA4 310 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Xlr4aA2BI40 215 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Gm9493F6SVV1 192 aaKnown RBP10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 2410141K09RikK7N769 464 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 PpibP24369 216 aaKnown RBP10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 S100a1P56565 94 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Xlr4cQ3TKR2 215 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Lhfpl5Q4KL25 219 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 XkrxQ5GH68 449 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Asphd2Q80VP9 343 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Dusp28Q8BTR5 163 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Olfr1090Q8VGA6 313 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Hdac8Q8VH37 377 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Rtn4ip1Q924D0 396 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Mrps15Q9DC71 258 aaKnown RBP10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Fgf21Q9JJN1 210 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Xlr4bQ9JJQ7 215 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 PlpbpQ9Z2Y8 274 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Celsr3Q91ZI0 3301 aa10.62□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Adamtsl5D3Z689 485 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Vmn2r101E9PZS9 857 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Gm21876F6XK35 94 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Ntn1O09118 604 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Hoxb6P09023 224 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Hoxa10P31310 416 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Slc6a1P31648 599 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Atp5j2P56135 88 aaKnown RBP10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Rps11P62281 158 aaKnown RBP10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Actc1P68033 377 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Acta1P68134 377 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Ndufb6Q3UIU2 128 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Slc25a40Q8BGP6 337 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Zc3h10Q8R205 435 aaKnown RBP10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Tctn3Q8R2Q6 595 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 NcmapQ99JS0 100 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Dusp12Q9D0T2 339 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 AplfQ9D842 499 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Dapp1Q9QXT1 280 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Phf1Q9Z1B8 559 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Slco5a1E9PVD9 850 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Slc16a5G5E8K6 468 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 P03976 113 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Sox7P40646 380 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 ArsgQ3TYD4 525 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Grxcr2Q3TYR5 254 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Wfdc5Q4KXB6 126 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Znf488Q5HZG9 337 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Adam9Q61072 845 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Zc4h2Q68FG0 224 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Cachd1Q6PDJ1 1288 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 HeltQ7TS99 240 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Agfg2Q80WC7 479 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Bdh1Q80XN0 343 aa10.61□□□□□ -0.71
Col9a1-202ENSMUST00000088349 Cldn34b3Q80ZS5 209 aa10.61□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 47.5 ms