RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Zfp954Q7TNU5 416 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Tmprss7Q8BIK6 829 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Rab15Q8K386 212 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Metap1dQ9CPW9 335 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 TrirQ9D735 173 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Plxdc2Q9DC11 530 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Trim39Q9ESN2 488 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Dll4Q9JI71 686 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Mrps34Q9JIK9 218 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Znf346Q9R0B7 294 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 TrdcA0A0G2JEU3 153 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Btbd8D3YUB6 377 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Zfp229E9PWT2 705 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Vmn1r120K7N6J6 305 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Rhox6O70238 227 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Mpzl2O70255 215 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Wipf3P0C7L0 485 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Znf271P15620 580 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Acvr2aP27038 513 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Rpl18P35980 188 aaKnown RBP7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Mbl2P41317 244 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Rpl6P47911 296 aaKnown RBP7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Lad1P57016 528 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Zdhhc2P59267 366 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Slc35f3Q1LZI2 421 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Bbs1Q3V3N7 593 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Tssk1bQ61241 365 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 CblcQ80XL1 496 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Zfp418Q8BFS8 652 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Slc30a6Q8BJM5 460 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Rdh16f2Q8K3M1 318 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Mapre2Q8R001 326 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Angptl8Q8R1L8 198 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Tmcc3Q8R310 477 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Ccdc92Q8VDN4 314 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Cdhr5Q8VHF2 831 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Isoc1Q91V64 297 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Slc22a7Q91WU2 540 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Dctn2Q99KJ8 402 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 St7Q99M96 577 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 PlgrktQ9D3P8 147 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Ptp4a3Q9D658 173 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Sdf2Q9DCT5 211 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Aqp9Q9JJJ3 295 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Hipk2Q9QZR5 1196 aa7.88□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gm13124A2A752 406 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Dcaf10A2AKB9 566 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Zyg11aA2BFL2 627 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr724K7N5X7 309 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Cers1P27545 350 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Rad52P43352 420 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 InaP46660 501 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Opn1swP51491 346 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Csnk2bP67871 215 aaKnown RBP7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 DtymkP97930 212 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Myl12bQ3THE2 172 aaKnown RBP7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gm732Q3V0P9 516 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Coq8bQ566J8 533 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Elavl2Q60899 360 aaKnown RBP7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Klhl26Q8BGY4 606 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Mfsd8Q8BH31 519 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Prox2Q8BII1 593 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Prss27Q8BJR6 328 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Rnf122Q8BP31 155 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Elfn1Q8C8T7 828 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Smco1Q8CEZ1 214 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Zfp119bQ8K0G9 543 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Rbms2Q8VC70 383 aaKnown RBP7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr788Q8VFI0 311 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr862Q8VFJ1 306 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 AmnQ99JB7 458 aaKnown RBP7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Zmynd19Q9CQG3 227 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Zdhhc13Q9CWU2 622 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 4933402D24RikQ9D4D3 167 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 NaaaQ9D7V9 362 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Izumo2Q9DA16 220 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Fbxo6Q9QZN4 295 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Adam25Q9R159 760 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Cxcl15Q9WVL7 167 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Loxl3Q9Z175 754 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Fam53aE9PV82 402 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Olfr619E9PV95 320 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Rpl3lE9PWZ3 407 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Zfp108E9Q8I5 642 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gm10340K7N708 205 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 H2-LP01897 362 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Sox3P53784 375 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 S100gP97816 79 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 VegfdP97946 358 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Il9rQ01114 468 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Btg2Q04211 158 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Tmprss11cQ1JRP2 431 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Gdpgp1Q3TLS3 386 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Mier2Q3U3N0 541 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Rnf224Q3UIW8 156 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 P2rx3Q3UR32 397 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Pgap1Q3UUQ7 922 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Slc22a14Q497L9 629 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 P4ha2Q60716 537 aa7.87□□□□□ -1.15
Trim39-201ENSMUST00000042717 Slc35a1Q61420 336 aa7.87□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms