RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 CAPSLQ8WWF8 208 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 AMELYQ99218 206 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 GALNT9Q9HCQ5 603 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 RANGRFQ9HD47 186 aaPredicted RBP15.34■□□□□ 0.05
PHGDH-229ENST00000641891 FRRS1LQ9P0K9 344 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 IKZF2Q9UKS7 526 aa15.34■□□□□ 0.05
PHGDH-229ENST00000641891 IGHV5-10-1A0A0J9YXX1 117 aa15.33■□□□□ 0.04
PHGDH-229ENST00000641891 ANKRD61A6NGH8 418 aa15.33■□□□□ 0.04
PHGDH-229ENST00000641891 H3BSH0 61 aa15.33■□□□□ 0.04
PHGDH-229ENST00000641891 NPIPB7O75200 414 aa15.33■□□□□ 0.04
PHGDH-229ENST00000641891 SCRG1O75711 98 aa15.33■□□□□ 0.04
PHGDH-229ENST00000641891 CLDN20P56880 219 aa15.33■□□□□ 0.04
PHGDH-229ENST00000641891 RAB25P57735 213 aa15.33■□□□□ 0.04
PHGDH-229ENST00000641891 ACKR1Q16570 336 aa15.33■□□□□ 0.04
PHGDH-229ENST00000641891 C1orf140Q5VVS0 124 aa15.33■□□□□ 0.04
PHGDH-229ENST00000641891 C7orf57Q8NEG2 295 aa15.33■□□□□ 0.04
PHGDH-229ENST00000641891 METTL21AQ8WXB1 218 aa15.33■□□□□ 0.04
PHGDH-229ENST00000641891 PMEPA1Q969W9 287 aa15.33■□□□□ 0.04
PHGDH-229ENST00000641891 FYTTD1Q96QD9 318 aaKnown RBP15.33■□□□□ 0.04
PHGDH-229ENST00000641891 NDEL1Q9GZM8 345 aa15.33■□□□□ 0.04
PHGDH-229ENST00000641891 MRPS7Q9Y2R9 242 aaKnown RBP15.33■□□□□ 0.04
PHGDH-229ENST00000641891 IGLV3-12A0A075B6K2 115 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 ADRB1P08588 477 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 FOSL2P15408 326 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 IFITM2Q01629 132 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 ACY1Q03154 408 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 SGCBQ16585 318 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 YIF1BQ5BJH7 314 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 FAM69AQ5T7M9 428 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 SLC6A19Q695T7 634 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 LCN10Q6JVE6 187 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 PYHIN1Q6K0P9 492 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 GRINAQ7Z429 371 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 ZNF433Q8N7K0 673 aaPredicted RBP15.32■□□□□ 0.04
PHGDH-229ENST00000641891 THEM6Q8WUY1 208 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 INTS14Q96SY0 518 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 SEMA4CQ9C0C4 833 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 APMAPQ9HDC9 416 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 ABRACLQ9P1F3 81 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 KCNG2Q9UJ96 466 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 COLQQ9Y215 455 aaPredicted RBP15.32■□□□□ 0.04
PHGDH-229ENST00000641891 HRH3Q9Y5N1 445 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 A8MVM7 634 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 TOX3O15405 576 aaPredicted RBP15.32■□□□□ 0.04
PHGDH-229ENST00000641891 ALOX12BO75342 701 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 CD3GP09693 182 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 TRAPPC2P0DI81 140 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 TRAPPC2BP0DI82 140 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 RCVRNP35243 200 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 SOX2P48431 317 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 DGCR2P98153 550 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 CD83Q01151 205 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 ALKBH1Q13686 389 aaKnown RBP15.32■□□□□ 0.04
PHGDH-229ENST00000641891 MELKQ14680 651 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 SF3B4Q15427 424 aaKnown RBP eCLIP15.32■□□□□ 0.042e-8■■■■■ 38.4
PHGDH-229ENST00000641891 ODF4Q2M2E3 257 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 ZFP69Q49AA0 526 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 BICRALQ6AI39 1079 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 MTFR2Q6P444 385 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 KRT74Q7RTS7 529 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 ZNF671Q8TAW3 534 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 ZNF519Q8TB69 540 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 SAP25Q8TEE9 199 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 ATOH1Q92858 354 aaPredicted RBP15.32■□□□□ 0.04
PHGDH-229ENST00000641891 CCDC74BQ96LY2 380 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 KLHL15Q96M94 604 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 ZFP3Q96NJ6 502 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 CTRCQ99895 268 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 TEKT2Q9UIF3 430 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 CPAMD8Q8IZJ3 1885 aa15.32■□□□□ 0.04
PHGDH-229ENST00000641891 A0A1B0GTQ1 180 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 XKRYO14609 159 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 MT-ATP6P00846 226 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 TACSTD2P09758 323 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 ALOX5APP20292 161 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 CENPAP49450 140 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 CLDN12P56749 244 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 RPL27P61353 136 aaKnown RBP15.31■□□□□ 0.04
PHGDH-229ENST00000641891 ETFDHQ16134 617 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 STPG1Q5TH74 334 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 FAM69BQ5VUD6 431 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 KDM8Q8N371 416 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 OR2I1PQ8NGU4 316 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 OR5AK2Q8NH90 309 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 ZNF417Q8TAU3 575 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 ZNF587Q96SQ5 575 aaPredicted RBP15.31■□□□□ 0.04
PHGDH-229ENST00000641891 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.31■□□□□ 0.04
PHGDH-229ENST00000641891 ABCG5Q9H222 651 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 TP63Q9H3D4 680 aaPredicted RBP15.31■□□□□ 0.04
PHGDH-229ENST00000641891 SPATA2Q9UM82 520 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 TRBV11-1A0A0K0K1C0 115 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 TMEM200CA6NKL6 621 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 SLC43A1O75387 559 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 HLA-DQA2P01906 255 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 BTCP35070 178 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 INSM1Q01101 510 aaPredicted RBP15.31■□□□□ 0.04
PHGDH-229ENST00000641891 HLA-BQ31612 363 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 SLC36A2Q495M3 483 aa15.31■□□□□ 0.04
PHGDH-229ENST00000641891 PAPD4Q6PIY7 484 aaKnown RBP15.31■□□□□ 0.04
PHGDH-229ENST00000641891 PRSS45Q7RTY3 260 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms