RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 BTG1P62324 171 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 ZNF85Q03923 595 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 LTBQ06643 244 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 MEP1BQ16820 701 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 PRTGQ2VWP7 1150 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 PRAMEF17Q5VTA0 474 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 CD200R1LQ6Q8B3 271 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 CBLN3Q6UW01 205 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 ZNF101Q8IZC7 436 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 OR13C3Q8NGS6 347 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 SNAPC3Q92966 411 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 MNTQ99583 582 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 NIPAL2Q9H841 368 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 IFT46Q9NQC8 304 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 TRAV1-2A0A0B4J238 106 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 SMLR1H3BR10 107 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 L7N2F9 121 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 TSPAN4O14817 238 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 PLA2G10O15496 165 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 PRSS3P35030 304 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 ZNF74Q16587 644 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 FHL5Q5TD97 284 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 METTL11BQ5VVY1 283 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 APOOLQ6UXV4 268 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 ZNF767PQ75MW2 155 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 GIMAP1Q8WWP7 306 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 DDIT4LQ96D03 193 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 DERL3Q96Q80 235 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 CRB3Q9BUF7 120 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 FOXQ1Q9C009 403 aa8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 TSPAN10Q9H1Z9 355 aaPredicted RBP8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 FARSAQ9Y285 508 aaKnown RBP8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 SIRT4Q9Y6E7 314 aaPredicted RBP8.4□□□□□ -1.06
RBFOX1-223ENST00000620507 IGHV3-20A0A0C4DH32 117 aa8.4□□□□□ -1.07
RBFOX1-223ENST00000620507 A0A1B0GVI7 797 aa8.4□□□□□ -1.07
RBFOX1-223ENST00000620507 A8MVM7 634 aa8.4□□□□□ -1.07
RBFOX1-223ENST00000620507 C9J4A7 227 aa8.4□□□□□ -1.07
RBFOX1-223ENST00000620507 FOXS1O43638 330 aa8.4□□□□□ -1.07
RBFOX1-223ENST00000620507 EIF4E2O60573 245 aaKnown RBP8.4□□□□□ -1.07
RBFOX1-223ENST00000620507 CYB5AP00167 134 aa8.4□□□□□ -1.07
RBFOX1-223ENST00000620507 SYPP08247 313 aa8.4□□□□□ -1.07
RBFOX1-223ENST00000620507 CT45A8P0DMV1 189 aa8.4□□□□□ -1.07
RBFOX1-223ENST00000620507 CT45A9P0DMV2 189 aa8.4□□□□□ -1.07
RBFOX1-223ENST00000620507 ATF1P18846 271 aa8.4□□□□□ -1.07
RBFOX1-223ENST00000620507 PSMB1P20618 241 aaKnown RBP8.4□□□□□ -1.07
RBFOX1-223ENST00000620507 CLRN1P58418 232 aa8.4□□□□□ -1.07
RBFOX1-223ENST00000620507 SQSTM1Q13501 440 aa8.4□□□□□ -1.07
RBFOX1-223ENST00000620507 CT45A2Q5DJT8 189 aa8.4□□□□□ -1.07
RBFOX1-223ENST00000620507 TMEM156Q8N614 296 aa8.4□□□□□ -1.07
RBFOX1-223ENST00000620507 OR5H6Q8NGV6 325 aa8.4□□□□□ -1.07
RBFOX1-223ENST00000620507 ASB17Q8WXJ9 295 aa8.4□□□□□ -1.07
RBFOX1-223ENST00000620507 DCLRE1CQ96SD1 692 aaKnown RBP8.4□□□□□ -1.07
RBFOX1-223ENST00000620507 ULBP3Q9BZM4 244 aa8.4□□□□□ -1.07
RBFOX1-223ENST00000620507 LAT2Q9GZY6 243 aa8.4□□□□□ -1.07
RBFOX1-223ENST00000620507 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.4□□□□□ -1.07
RBFOX1-223ENST00000620507 TMEM185BQ9H7F4 350 aa8.4□□□□□ -1.07
RBFOX1-223ENST00000620507 MMP25Q9NPA2 562 aa8.4□□□□□ -1.07
RBFOX1-223ENST00000620507 ZNF346Q9UL40 294 aaKnown RBP8.4□□□□□ -1.07
RBFOX1-223ENST00000620507 IGHV1OR15-9A0A0B4J2B8 117 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 A6NIZ1 184 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 IFITM5A6NNB3 132 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 M0R233 179 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 PTP4A3O75365 173 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 IGKV1D-16P01601 117 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 GPR3P46089 330 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 RAP1BP61224 184 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 RAP1AP62834 184 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 IL10RAQ13651 578 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 DMKNQ6E0U4 476 aaPredicted RBP8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 ELMOD2Q8IZ81 293 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 KDM8Q8N371 416 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 SDHCQ99643 169 aaPredicted RBP8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 FKRPQ9H9S5 495 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 PPIEQ9UNP9 301 aaKnown RBP8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 LOC100509620A0A075B734 347 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 FXYD6-FXYD2A0A087WZ82 144 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 MEGF11A6BM72 1044 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 C2orf72A6NCS6 295 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 FRG2CA6NGY1 282 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 PRAF2O60831 178 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 MT-ATP6P00846 226 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 CTSBP07858 339 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 NUP62P37198 522 aaPredicted RBP8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 DAP3P51398 398 aaKnown RBP8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 GPLD1P80108 840 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 POU3F1Q03052 451 aaPredicted RBP8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 KLHL26Q53HC5 615 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 EMC4Q5J8M3 183 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 C1orf140Q5VVS0 124 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 NPSR1Q6W5P4 371 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 SPERTQ8NA61 448 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 OR6N1Q8NGY5 312 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 CTHRC1Q96CG8 243 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 KTI12Q96EK9 354 aaPredicted RBP8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 DPCDQ9BVM2 203 aaPredicted RBP8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 POTEKPQ9BYX7 375 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 FXYD6Q9H0Q3 95 aa8.39□□□□□ -1.07
RBFOX1-223ENST00000620507 TTYH1Q9H313 450 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms