RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 SNAPC1Q16533 368 aa20.36■□□□□ 0.85
IRF3-227ENST00000600911 NSUN5P2Q63ZY6 315 aa20.36■□□□□ 0.85
IRF3-227ENST00000600911 GCNT2Q8N0V5 402 aa20.36■□□□□ 0.85
IRF3-227ENST00000600911 MARVELD2Q8N4S9 558 aa20.36■□□□□ 0.85
IRF3-227ENST00000600911 ARIH2OSQ8N7S6 290 aa20.36■□□□□ 0.85
IRF3-227ENST00000600911 SLC37A3Q8NCC5 494 aa20.36■□□□□ 0.85
IRF3-227ENST00000600911 ST6GALNAC3Q8NDV1 305 aa20.36■□□□□ 0.85
IRF3-227ENST00000600911 BBS1Q8NFJ9 593 aa20.36■□□□□ 0.85
IRF3-227ENST00000600911 ZNRF4Q8WWF5 429 aa20.36■□□□□ 0.85
IRF3-227ENST00000600911 CNBD2Q96M20 576 aa20.36■□□□□ 0.85
IRF3-227ENST00000600911 SF3B5Q9BWJ5 86 aaKnown RBP20.36■□□□□ 0.85
IRF3-227ENST00000600911 HINT3Q9NQE9 182 aaKnown RBP20.36■□□□□ 0.85
IRF3-227ENST00000600911 CMC2Q9NRP2 79 aa20.36■□□□□ 0.85
IRF3-227ENST00000600911 C1QL1O75973 258 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 ZNF432O94892 652 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 CLUP10909 449 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 APEHP13798 732 aaKnown RBP20.35■□□□□ 0.85
IRF3-227ENST00000600911 PCYT1AP49585 367 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 CD47Q08722 323 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 CAMK2DQ13557 499 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 PHYHD1Q5SRE7 291 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 C1orf185Q5T7R7 199 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 NUFIP2Q7Z417 695 aaKnown RBP20.35■□□□□ 0.85
IRF3-227ENST00000600911 SLC43A2Q8N370 569 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 NAXEQ8NCW5 288 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 NPEPL1Q8NDH3 523 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 CNIH3Q8TBE1 160 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 CALHM2Q9HA72 323 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 GRHPRQ9UBQ7 328 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 NBASA2RRP1 2371 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 INTS1Q8N201 2190 aaKnown RBP20.35■□□□□ 0.85
IRF3-227ENST00000600911 IGKV1D-43A0A0B4J1Z2 117 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 OR6C68A6NDL8 312 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 ARHGEF9O43307 516 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 TRMUO75648 421 aaKnown RBP20.35■□□□□ 0.85
IRF3-227ENST00000600911 BCL10O95999 233 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 MYF6P23409 242 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 ACVR2AP27037 513 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 FOXF2Q12947 444 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 GUSBP1Q15486 140 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 CARD17Q5XLA6 110 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 TSSK2Q96PF2 358 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 BCO1Q9HAY6 547 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 BAIAP2Q9UQB8 552 aa20.35■□□□□ 0.85
IRF3-227ENST00000600911 NPIPB13A6NJU9 1138 aa20.34■□□□□ 0.85
IRF3-227ENST00000600911 CD8B2A6NJW9 211 aa20.34■□□□□ 0.85
IRF3-227ENST00000600911 NPIPB4C9JG80 1138 aa20.34■□□□□ 0.85
IRF3-227ENST00000600911 DCTN6O00399 190 aa20.34■□□□□ 0.85
IRF3-227ENST00000600911 TLX2O43763 284 aaPredicted RBP20.34■□□□□ 0.85
IRF3-227ENST00000600911 WDR1O75083 606 aa20.34■□□□□ 0.85
IRF3-227ENST00000600911 WBP4O75554 376 aaKnown RBP20.34■□□□□ 0.85
IRF3-227ENST00000600911 IL5RAQ01344 420 aa20.34■□□□□ 0.85
IRF3-227ENST00000600911 FMODQ06828 376 aa20.34■□□□□ 0.85
IRF3-227ENST00000600911 MAD2L1BPQ15013 274 aaPredicted RBP20.34■□□□□ 0.85
IRF3-227ENST00000600911 SMN1Q16637 294 aaKnown RBP20.34■□□□□ 0.85
IRF3-227ENST00000600911 SOWAHCQ53LP3 525 aaPredicted RBP20.34■□□□□ 0.85
IRF3-227ENST00000600911 LEG1Q6P5S2 330 aa20.34■□□□□ 0.85
IRF3-227ENST00000600911 CASP12Q6UXS9 341 aa20.34■□□□□ 0.85
IRF3-227ENST00000600911 P4HA3Q7Z4N8 544 aa20.34■□□□□ 0.85
IRF3-227ENST00000600911 SYT14Q8NB59 555 aa20.34■□□□□ 0.85
IRF3-227ENST00000600911 PTP4A1Q93096 173 aa20.34■□□□□ 0.85
IRF3-227ENST00000600911 OR2M2Q96R28 347 aa20.34■□□□□ 0.85
IRF3-227ENST00000600911 KCNK17Q96T54 332 aa20.34■□□□□ 0.85
IRF3-227ENST00000600911 KLHL9Q9P2J3 617 aa20.34■□□□□ 0.85
IRF3-227ENST00000600911 RP1L1Q8IWN7 2480 aaPredicted RBP20.34■□□□□ 0.85
IRF3-227ENST00000600911 MBD3L4A6NDZ8 208 aaPredicted RBP20.33■□□□□ 0.84
IRF3-227ENST00000600911 MBD3L3A6NE82 208 aaPredicted RBP20.33■□□□□ 0.84
IRF3-227ENST00000600911 MBD3L5A6NJ08 208 aaPredicted RBP20.33■□□□□ 0.84
IRF3-227ENST00000600911 DENRO43583 198 aaKnown RBP20.33■□□□□ 0.84
IRF3-227ENST00000600911 PGA4P0DJD7 388 aa20.33■□□□□ 0.84
IRF3-227ENST00000600911 PGA3P0DJD8 388 aa20.33■□□□□ 0.84
IRF3-227ENST00000600911 AGTR1P30556 359 aa20.33■□□□□ 0.84
IRF3-227ENST00000600911 CDC42P60953 191 aa20.33■□□□□ 0.84
IRF3-227ENST00000600911 ITGADQ13349 1161 aa20.33■□□□□ 0.84
IRF3-227ENST00000600911 PDK3Q15120 406 aa20.33■□□□□ 0.84
IRF3-227ENST00000600911 TAF11Q15544 211 aa20.33■□□□□ 0.84
IRF3-227ENST00000600911 GPR139Q6DWJ6 353 aa20.33■□□□□ 0.84
IRF3-227ENST00000600911 NIPAL3Q6P499 406 aa20.33■□□□□ 0.84
IRF3-227ENST00000600911 TMEM123Q8N131 208 aa20.33■□□□□ 0.84
IRF3-227ENST00000600911 OR9Q1Q8NGQ5 310 aa20.33■□□□□ 0.84
IRF3-227ENST00000600911 RHOXF1Q8NHV9 184 aa20.33■□□□□ 0.84
IRF3-227ENST00000600911 MBD3L2Q8NHZ7 208 aaPredicted RBP20.33■□□□□ 0.84
IRF3-227ENST00000600911 WNT2BQ93097 391 aa20.33■□□□□ 0.84
IRF3-227ENST00000600911 MRPL13Q9BYD1 178 aaKnown RBP20.33■□□□□ 0.84
IRF3-227ENST00000600911 DNAJC27Q9NZQ0 273 aa20.33■□□□□ 0.84
IRF3-227ENST00000600911 POLEQ07864 2286 aa20.33■□□□□ 0.84
IRF3-227ENST00000600911 FIGNL2A6NMB9 653 aa20.32■□□□□ 0.84
IRF3-227ENST00000600911 PRRG2O14669 202 aa20.32■□□□□ 0.84
IRF3-227ENST00000600911 HMGN1P05114 100 aa20.32■□□□□ 0.84
IRF3-227ENST00000600911 GYPBP06028 91 aa20.32■□□□□ 0.84
IRF3-227ENST00000600911 GABRA1P14867 456 aa20.32■□□□□ 0.84
IRF3-227ENST00000600911 ACADSP16219 412 aa20.32■□□□□ 0.84
IRF3-227ENST00000600911 DAP3P51398 398 aaKnown RBP20.32■□□□□ 0.84
IRF3-227ENST00000600911 PLBD1Q6P4A8 553 aa20.32■□□□□ 0.84
IRF3-227ENST00000600911 CPOQ8IVL8 374 aa20.32■□□□□ 0.84
IRF3-227ENST00000600911 C8orf59Q8N0T1 100 aaPredicted RBP20.32■□□□□ 0.84
IRF3-227ENST00000600911 TMEM163Q8TC26 289 aa20.32■□□□□ 0.84
IRF3-227ENST00000600911 FBLIM1Q8WUP2 373 aa20.32■□□□□ 0.84
IRF3-227ENST00000600911 INTS12Q96CB8 462 aaKnown RBP20.32■□□□□ 0.84
IRF3-227ENST00000600911 IDH3BO43837 385 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms