RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 GLCCI1Q86VQ1 547 aa14.05□□□□□ -0.16
LIG1-205ENST00000593425 SEMA6DQ8NFY4 1073 aa14.05□□□□□ -0.16
LIG1-205ENST00000593425 OR6S1Q8NH40 331 aa14.05□□□□□ -0.16
LIG1-205ENST00000593425 RNF217Q8TC41 542 aa14.05□□□□□ -0.16
LIG1-205ENST00000593425 YIPF5Q969M3 257 aa14.05□□□□□ -0.16
LIG1-205ENST00000593425 LRR1Q96L50 414 aa14.05□□□□□ -0.16
LIG1-205ENST00000593425 ULBP2Q9BZM5 246 aa14.05□□□□□ -0.16
LIG1-205ENST00000593425 METTL17Q9H7H0 456 aaPredicted RBP14.05□□□□□ -0.16
LIG1-205ENST00000593425 LPAR2Q9HBW0 351 aa14.05□□□□□ -0.16
LIG1-205ENST00000593425 SLAMF8Q9P0V8 285 aa14.05□□□□□ -0.16
LIG1-205ENST00000593425 TESQ9UGI8 421 aaKnown RBP14.05□□□□□ -0.16
LIG1-205ENST00000593425 METRNQ9UJH8 293 aa14.05□□□□□ -0.16
LIG1-205ENST00000593425 FZR1Q9UM11 496 aa14.05□□□□□ -0.16
LIG1-205ENST00000593425 POFUT2Q9Y2G5 429 aa14.05□□□□□ -0.16
LIG1-205ENST00000593425 CORINQ9Y5Q5 1042 aa14.05□□□□□ -0.16
LIG1-205ENST00000593425 A0A0B4J2E0 115 aa14.04□□□□□ -0.16
LIG1-205ENST00000593425 A0A1B0GX12 115 aa14.04□□□□□ -0.16
LIG1-205ENST00000593425 B4DSR2 109 aa14.04□□□□□ -0.16
LIG1-205ENST00000593425 TPST2O60704 377 aa14.04□□□□□ -0.16
LIG1-205ENST00000593425 SERPINI2O75830 405 aa14.04□□□□□ -0.16
LIG1-205ENST00000593425 NCR1O76036 304 aa14.04□□□□□ -0.16
LIG1-205ENST00000593425 ACHEP22303 614 aa14.04□□□□□ -0.16
LIG1-205ENST00000593425 LRIF1Q5T3J3 769 aa14.04□□□□□ -0.16
LIG1-205ENST00000593425 GCNT6Q5T4J0 391 aa14.04□□□□□ -0.16
LIG1-205ENST00000593425 GOLGA6L1Q8N7Z2 621 aa14.04□□□□□ -0.16
LIG1-205ENST00000593425 SCAIQ8N9R8 606 aa14.04□□□□□ -0.16
LIG1-205ENST00000593425 FGFBP3Q8TAT2 258 aa14.04□□□□□ -0.16
LIG1-205ENST00000593425 SLC47A1Q96FL8 570 aa14.04□□□□□ -0.16
LIG1-205ENST00000593425 FOXB1Q99853 325 aa14.04□□□□□ -0.16
LIG1-205ENST00000593425 ASPNQ9BXN1 380 aa14.04□□□□□ -0.16
LIG1-205ENST00000593425 RACGAP1Q9H0H5 632 aa14.04□□□□□ -0.16
LIG1-205ENST00000593425 MS4A5Q9H3V2 200 aa14.04□□□□□ -0.16
LIG1-205ENST00000593425 OCEL1Q9H607 264 aa14.04□□□□□ -0.16
LIG1-205ENST00000593425 B3GAT2Q9NPZ5 323 aa14.04□□□□□ -0.16
LIG1-205ENST00000593425 MRPL39Q9NYK5 338 aaKnown RBP14.04□□□□□ -0.16
LIG1-205ENST00000593425 SPEF1Q9Y4P9 236 aa14.04□□□□□ -0.16
LIG1-205ENST00000593425 NOX1Q9Y5S8 564 aa14.04□□□□□ -0.16
LIG1-205ENST00000593425 NBEAL1Q6ZS30 2694 aa14.04□□□□□ -0.16
LIG1-205ENST00000593425 RAB36O95755 333 aa14.03□□□□□ -0.16
LIG1-205ENST00000593425 PATE4P0C8F1 98 aa14.03□□□□□ -0.16
LIG1-205ENST00000593425 SAGP10523 405 aaPredicted RBP14.03□□□□□ -0.16
LIG1-205ENST00000593425 PCMT1P22061 227 aa14.03□□□□□ -0.16
LIG1-205ENST00000593425 CFPP27918 469 aa14.03□□□□□ -0.16
LIG1-205ENST00000593425 RGS8P57771 180 aaPredicted RBP14.03□□□□□ -0.16
LIG1-205ENST00000593425 NCALDP61601 193 aa14.03□□□□□ -0.16
LIG1-205ENST00000593425 RAB1AP62820 205 aa14.03□□□□□ -0.16
LIG1-205ENST00000593425 CDK6Q00534 326 aa14.03□□□□□ -0.16
LIG1-205ENST00000593425 PUDPQ08623 228 aa14.03□□□□□ -0.16
LIG1-205ENST00000593425 PMS2P3Q13401 168 aa14.03□□□□□ -0.16
LIG1-205ENST00000593425 RAB39AQ14964 217 aa14.03□□□□□ -0.16
LIG1-205ENST00000593425 OR1Q1Q15612 314 aa14.03□□□□□ -0.16
LIG1-205ENST00000593425 C12orf54Q6X4T0 127 aa14.03□□□□□ -0.16
LIG1-205ENST00000593425 DEF8Q6ZN54 512 aa14.03□□□□□ -0.16
LIG1-205ENST00000593425 ZNF584Q8IVC4 421 aa14.03□□□□□ -0.16
LIG1-205ENST00000593425 FUNDC1Q8IVP5 155 aa14.03□□□□□ -0.16
LIG1-205ENST00000593425 OR6N1Q8NGY5 312 aa14.03□□□□□ -0.16
LIG1-205ENST00000593425 RDH5Q92781 318 aa14.03□□□□□ -0.16
LIG1-205ENST00000593425 TMEM186Q96B77 213 aa14.03□□□□□ -0.16
LIG1-205ENST00000593425 EPYCQ99645 322 aa14.03□□□□□ -0.16
LIG1-205ENST00000593425 IKZF5Q9H5V7 419 aa14.03□□□□□ -0.16
LIG1-205ENST00000593425 ZNF275Q9NSD4 429 aaPredicted RBP14.03□□□□□ -0.16
LIG1-205ENST00000593425 HIF1ANQ9NWT6 349 aa14.03□□□□□ -0.16
LIG1-205ENST00000593425 VAPAQ9P0L0 249 aa14.03□□□□□ -0.16
LIG1-205ENST00000593425 ZNF726A6NNF4 738 aa14.02□□□□□ -0.17
LIG1-205ENST00000593425 PLPP3O14495 311 aa14.02□□□□□ -0.17
LIG1-205ENST00000593425 NAT2P11245 290 aa14.02□□□□□ -0.17
LIG1-205ENST00000593425 AHCYP23526 432 aa14.02□□□□□ -0.17
LIG1-205ENST00000593425 CDH12P55289 794 aa14.02□□□□□ -0.17
LIG1-205ENST00000593425 GALK2Q01415 458 aa14.02□□□□□ -0.17
LIG1-205ENST00000593425 ALKBH6Q3KRA9 238 aa14.02□□□□□ -0.17
LIG1-205ENST00000593425 PAGE3Q5JUK9 113 aa14.02□□□□□ -0.17
LIG1-205ENST00000593425 GKAP1Q5VSY0 366 aaPredicted RBP14.02□□□□□ -0.17
LIG1-205ENST00000593425 REEP3Q6NUK4 255 aa14.02□□□□□ -0.17
LIG1-205ENST00000593425 KRT73Q86Y46 540 aa14.02□□□□□ -0.17
LIG1-205ENST00000593425 SKA3Q8IX90 412 aa14.02□□□□□ -0.17
LIG1-205ENST00000593425 SPATA5L1Q9BVQ7 753 aa14.02□□□□□ -0.17
LIG1-205ENST00000593425 PLA2G12AQ9BZM1 189 aa14.02□□□□□ -0.17
LIG1-205ENST00000593425 TMEM27Q9HBJ8 222 aa14.02□□□□□ -0.17
LIG1-205ENST00000593425 TREM2Q9NZC2 230 aa14.02□□□□□ -0.17
LIG1-205ENST00000593425 SELENONQ9NZV5 590 aa14.02□□□□□ -0.17
LIG1-205ENST00000593425 RAB21Q9UL25 225 aa14.02□□□□□ -0.17
LIG1-205ENST00000593425 USH1CQ9Y6N9 552 aa14.02□□□□□ -0.17
LIG1-205ENST00000593425 TRBV5-3A0A0A0MS03 114 aa14.01□□□□□ -0.17
LIG1-205ENST00000593425 C11orf98E9PRG8 122 aa14.01□□□□□ -0.17
LIG1-205ENST00000593425 RP2O75695 350 aa14.01□□□□□ -0.17
LIG1-205ENST00000593425 RGS9O75916 674 aaPredicted RBP14.01□□□□□ -0.17
LIG1-205ENST00000593425 UBL3O95164 117 aa14.01□□□□□ -0.17
LIG1-205ENST00000593425 TFP02787 698 aa14.01□□□□□ -0.17
LIG1-205ENST00000593425 MSMBP08118 114 aa14.01□□□□□ -0.17
LIG1-205ENST00000593425 GAAP10253 952 aa14.01□□□□□ -0.17
LIG1-205ENST00000593425 AQP1P29972 269 aa14.01□□□□□ -0.17
LIG1-205ENST00000593425 CSNK1A1P48729 337 aa14.01□□□□□ -0.17
LIG1-205ENST00000593425 MRPL19P49406 292 aaKnown RBP14.01□□□□□ -0.17
LIG1-205ENST00000593425 BIDP55957 195 aa14.01□□□□□ -0.17
LIG1-205ENST00000593425 RPS23P62266 143 aaKnown RBP14.01□□□□□ -0.17
LIG1-205ENST00000593425 RUNX1T1Q06455 604 aa14.01□□□□□ -0.17
LIG1-205ENST00000593425 SCARB2Q14108 478 aa14.01□□□□□ -0.17
LIG1-205ENST00000593425 EPGNQ6UW88 154 aa14.01□□□□□ -0.17
LIG1-205ENST00000593425 THSD4Q6ZMP0 1018 aa14.01□□□□□ -0.17
LIG1-205ENST00000593425 WDR88Q6ZMY6 472 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms