RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 IGHV3-9P01782 118 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 IGHA1P01876 353 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 ERCC1P07992 297 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-226ENST00000591534 ITGA2P17301 1181 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 SRD5A1P18405 259 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 PDLIM4P50479 330 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 SLC16A1P53985 500 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 OR2B6P58173 313 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 PRPS1P60891 318 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 SNRPD2P62316 118 aaKnown RBP8.27□□□□□ -1.09
BRCA1-226ENST00000591534 LIPEQ05469 1076 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 GABRA6Q16445 453 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 FAM98BQ52LJ0 330 aaKnown RBP8.27□□□□□ -1.09
BRCA1-226ENST00000591534 C11orf71Q6IPW1 123 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 FAM166AQ6J272 317 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 CASP12Q6UXS9 341 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 CMIPQ8IY22 773 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 ZNF525Q8N782 197 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 MIPOL1Q8TD10 442 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 UBE2FQ969M7 185 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 ZNF524Q96C55 264 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 PIMREGQ9BSJ6 248 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 ZNF350Q9GZX5 532 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 PAIP1Q9H074 479 aaKnown RBP8.27□□□□□ -1.09
BRCA1-226ENST00000591534 OBP2BQ9NPH6 170 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 EXOSC3Q9NQT5 275 aaKnown RBP8.27□□□□□ -1.09
BRCA1-226ENST00000591534 P2RX2Q9UBL9 471 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 CD300AQ9UGN4 299 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 SLC7A8Q9UHI5 535 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 MKLN1Q9UL63 735 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 POMPQ9Y244 141 aa8.27□□□□□ -1.09
BRCA1-226ENST00000591534 TRBV5-3A0A0A0MS03 114 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 CENPVL1A0A0U1RR11 272 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 OR6C65A6NJZ3 312 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 ZNF716A6NP11 495 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 FXYD1O00168 92 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 ZNF208O43345 1280 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 KIAA0513O60268 411 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 FCMRO60667 390 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 KRT33AO76009 404 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 IFNGR1P15260 489 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 PTNP21246 168 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 MPGP29372 298 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 RYKP34925 604 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 CRATP43155 626 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 POLR2HP52434 150 aaKnown RBP8.26□□□□□ -1.09
BRCA1-226ENST00000591534 ARHGDIAP52565 204 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 CRISP3P54108 245 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 KCNJ10P78508 379 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 RGNQ15493 299 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 PAGE3Q5JUK9 113 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 NKAPLQ5M9Q1 402 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 GCNT6Q5T4J0 391 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 LIPNQ5VXI9 398 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 LCN8Q6JVE9 175 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 MICU2Q8IYU8 434 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 POMGNT2Q8NAT1 580 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 HIPK4Q8NE63 616 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 C10orf105Q8TEF2 133 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 XAGE5Q8WWM1 108 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 OR51I1Q9H343 314 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 MAGIXQ9H6Y5 334 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 CTPS2Q9NRF8 586 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 VAPAQ9P0L0 249 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 SLC13A4Q9UKG4 626 aa8.26□□□□□ -1.09
BRCA1-226ENST00000591534 SONP18583 2426 aaKnown RBP8.25□□□□□ -1.09
BRCA1-226ENST00000591534 RTTNQ86VV8 2226 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 LOC390937A0A1W2PQ73 354 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 MGRN1O60291 552 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 GSNP06396 782 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 C8BP07358 591 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 H2AFB1P0C5Y9 115 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 H2AFB2P0C5Z0 115 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 OR12D1P0DN82 309 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 ETS2P15036 469 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 PCGF2P35227 344 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 IDH2P48735 452 aaKnown RBP8.25□□□□□ -1.09
BRCA1-226ENST00000591534 GSK3BP49841 420 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 DSTNP60981 165 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 ELF3P78545 371 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-226ENST00000591534 SNCBQ16143 134 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 VMACQ2NL98 169 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 IQCCQ4KMZ1 466 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 GPAT3Q53EU6 434 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 AP1ARQ63HQ0 302 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 SAXO2Q658L1 398 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 GLYATQ6IB77 296 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 REEP3Q6NUK4 255 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 UGT2A3Q6UWM9 527 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 HMGN2P46Q86SG4 172 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 SPATA24Q86W54 205 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 ZDHHC13Q8IUH4 622 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 ZNF440Q8IYI8 595 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 FAM71CQ8NEG0 241 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 OR10A6Q8NH74 314 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 SLC26A7Q8TE54 656 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 FAM162AQ96A26 154 aa8.25□□□□□ -1.09
BRCA1-226ENST00000591534 CCDC124Q96CT7 223 aaKnown RBP8.25□□□□□ -1.09
BRCA1-226ENST00000591534 DUS3LQ96G46 650 aaKnown RBP8.25□□□□□ -1.09
BRCA1-226ENST00000591534 CPPED1Q9BRF8 314 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms