RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 EGR1P18146 543 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 PCMT1P22061 227 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 CBLP22681 906 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 PPIBP23284 216 aaKnown RBP9.12□□□□□ -0.95
RFFL-209ENST00000581265 SRP14P37108 136 aaKnown RBP9.12□□□□□ -0.95
RFFL-209ENST00000581265 AQP5P55064 265 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 RAB1AP62820 205 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 IL1RL1Q01638 556 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 PIGFQ07326 219 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 PMS2P3Q13401 168 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 OR1Q1Q15612 314 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 FXNQ16595 210 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 TRMT5Q32P41 509 aaKnown RBP9.12□□□□□ -0.95
RFFL-209ENST00000581265 GLIPR1L2Q4G1C9 344 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 GCNT6Q5T4J0 391 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 CARD17Q5XLA6 110 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 ZNF813Q6ZN06 617 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 SNX32Q86XE0 403 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 FUNDC1Q8IVP5 155 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 C10orf111Q8N326 155 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 BHLHE22Q8NFJ8 381 aaPredicted RBP9.12□□□□□ -0.95
RFFL-209ENST00000581265 NFKBIDQ8NI38 313 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 ASPNQ9BXN1 380 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 RACGAP1Q9H0H5 632 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 TMEM38AQ9H6F2 299 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 EVA1AQ9H8M9 152 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 TMEM27Q9HBJ8 222 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 B3GAT2Q9NPZ5 323 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 SLC52A3Q9NQ40 469 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 MED29Q9NX70 200 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 NKIRAS1Q9NYS0 192 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 ZNF224Q9NZL3 707 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 SELENONQ9NZV5 590 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 TESQ9UGI8 421 aaKnown RBP9.12□□□□□ -0.95
RFFL-209ENST00000581265 POFUT2Q9Y2G5 429 aa9.12□□□□□ -0.95
RFFL-209ENST00000581265 A0A0A6YYJ9 748 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 A0A0G2JK05 382 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 PLPP3O14495 311 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 SERPINB7O75635 380 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 TGDSO95455 350 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 B4GALT1P15291 398 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 GPX2P18283 190 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 COL8A2P25067 703 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 GIPRP48546 466 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 CDH12P55289 794 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 TMEM33P57088 247 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 RGS8P57771 180 aaPredicted RBP9.11□□□□□ -0.95
RFFL-209ENST00000581265 MRPS11P82912 194 aaKnown RBP9.11□□□□□ -0.95
RFFL-209ENST00000581265 PUDPQ08623 228 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 CAMK2DQ13557 499 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 ELFN2Q5R3F8 820 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 SWT1Q5T5J6 900 aaKnown RBP9.11□□□□□ -0.95
RFFL-209ENST00000581265 REP15Q6BDI9 236 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 LINC00114Q6XXX2 140 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 DEF8Q6ZN54 512 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 PIWIL3Q7Z3Z3 882 aaKnown RBP9.11□□□□□ -0.95
RFFL-209ENST00000581265 WDFY1Q8IWB7 410 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 OR6N1Q8NGY5 312 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 RDH5Q92781 318 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 MOGAT1Q96PD6 335 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 FOXB1Q99853 325 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 WFDC6Q9BQY6 131 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 TMEM43Q9BTV4 400 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 TPK1Q9H3S4 243 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 VAPAQ9P0L0 249 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 METRNQ9UJH8 293 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 FBXL3Q9UKT7 428 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 USH1CQ9Y6N9 552 aa9.11□□□□□ -0.95
RFFL-209ENST00000581265 TRBV5-3A0A0A0MS03 114 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 LRRN3E7EW58 273 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 FMO6PO60774 539 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 MFN2O95140 757 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 MT-ATP6P00846 226 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 HPXP02790 462 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 SERPINA5P05154 406 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 ITGA2P17301 1181 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 ACHEP22303 614 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 SLC6A2P23975 617 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 PTDSS1P48651 473 aaKnown RBP9.1□□□□□ -0.95
RFFL-209ENST00000581265 SEC24CP53992 1094 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 STX1BP61266 288 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 MAGOHP61326 146 aaKnown RBP9.1□□□□□ -0.95
RFFL-209ENST00000581265 NCALDP61601 193 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 RPS23P62266 143 aaKnown RBP9.1□□□□□ -0.95
RFFL-209ENST00000581265 GALK2Q01415 458 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 CCNIQ14094 377 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 SCARB2Q14108 478 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 PAGE3Q5JUK9 113 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 LRP11Q86VZ4 500 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 CARM1Q86X55 608 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 SKA3Q8IX90 412 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.1□□□□□ -0.95
RFFL-209ENST00000581265 RNF217Q8TC41 542 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 TLCD1Q96CP7 247 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 SPDL1Q96EA4 605 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 ZNF607Q96SK3 696 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 SYT3Q9BQG1 590 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 ULBP2Q9BZM5 246 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 TCF7L2Q9NQB0 619 aa9.1□□□□□ -0.95
RFFL-209ENST00000581265 SLC13A4Q9UKG4 626 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms