RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 GABRA1P14867 456 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 RASGEF1BQ0VAM2 473 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 MPPED2Q15777 294 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 SFRP5Q5T4F7 317 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 LINC01590Q5TEZ4 76 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 OR5M1Q8NGP8 315 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 HOXB13Q92826 284 aaPredicted RBP9.81□□□□□ -0.84
CCDC40-207ENST00000572253 CXorf58Q96LI9 332 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 REG4Q9BYZ8 158 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 TRPV4Q9HBA0 871 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 MRM2Q9UI43 246 aaKnown RBP9.81□□□□□ -0.84
CCDC40-207ENST00000572253 SCML1Q9UN30 329 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 TRAV18A0A075B6X5 111 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 TRBV5-5A0A0J9YX44 114 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 PHYHO14832 338 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 AQP8O94778 261 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 VSIG10L2P0DP72 767 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 CTRB1P17538 263 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 PRSS3P35030 304 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 CDKN2AP42771 156 aaKnown RBP9.81□□□□□ -0.84
CCDC40-207ENST00000572253 CTRB2Q6GPI1 263 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 RCBTB1Q8NDN9 531 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 OR6N1Q8NGY5 312 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 OR8K3Q8NH51 312 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 TMEM106AQ96A25 262 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 C3orf49Q96BT1 292 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 DGAT2Q96PD7 388 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 OR1F2PQ96R84 312 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 C1QTNF6Q9BXI9 259 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 MFFQ9GZY8 342 aa9.81□□□□□ -0.84
CCDC40-207ENST00000572253 GGT3PA6NGU5 568 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 IMPA2O14732 288 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 RNH1P13489 461 aaKnown RBP9.8□□□□□ -0.84
CCDC40-207ENST00000572253 ACTBP60709 375 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 ACTG1P63261 375 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 OC90Q02509 493 aaPredicted RBP9.8□□□□□ -0.84
CCDC40-207ENST00000572253 NNATQ16517 81 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 ZNF684Q5T5D7 378 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 WBP2NLQ6ICG8 309 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 HSD17B13Q7Z5P4 300 aaPredicted RBP9.8□□□□□ -0.84
CCDC40-207ENST00000572253 LRRTM1Q86UE6 522 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 IQCF2Q8IXL9 164 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 ASB12Q8WXK4 309 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 LINC01553A4QN01 128 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 SRPX2O60687 465 aaPredicted RBP9.8□□□□□ -0.84
CCDC40-207ENST00000572253 ZNF254O75437 659 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 ADRA2CP18825 462 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 SDHAP31040 664 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 ADH7P40394 386 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 RPS4XP62701 263 aaKnown RBP9.8□□□□□ -0.84
CCDC40-207ENST00000572253 RAB11BQ15907 218 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 TUSC1Q2TAM9 212 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 ANKRD16Q6P6B7 361 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 DGAT2L6Q6ZPD8 337 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 ZNF595Q8IYB9 648 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 OR9A4Q8NGU2 314 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 SPACA7Q96KW9 195 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 VSTM2LQ96N03 204 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 WDR76Q9H967 626 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 FBRSQ9HAH7 460 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 APMAPQ9HDC9 416 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 STARD5Q9NSY2 213 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 FRRS1LQ9P0K9 344 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 TVP23AA6NH52 213 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 HSPB2A8KAH6 182 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 CLDN4O14493 209 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 UPK3AO75631 287 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 LPLP06858 475 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 PROS1P07225 676 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 POU3F2P20265 443 aaPredicted RBP9.8□□□□□ -0.84
CCDC40-207ENST00000572253 CALCRP30988 508 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 NTSR1P30989 418 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 GDI1P31150 447 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 RPS15P62841 145 aaKnown RBP9.8□□□□□ -0.84
CCDC40-207ENST00000572253 FAM53BQ14153 422 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 HSPB2Q16082 182 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 CDH26Q8IXH8 852 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 OR2G2Q8NGZ5 317 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 TSSK2Q96PF2 358 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 POTEKPQ9BYX7 375 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 SEMA4CQ9C0C4 833 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 SLC6A17Q9H1V8 727 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 LRIT1Q9P2V4 623 aa9.8□□□□□ -0.84
CCDC40-207ENST00000572253 FAM221BA6H8Z2 402 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 AGTR1P30556 359 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 SSBP1Q04837 148 aaKnown RBP9.79□□□□□ -0.84
CCDC40-207ENST00000572253 MAMSTRQ6ZN01 415 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 SLC36A1Q7Z2H8 476 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 ZNF454Q8N9F8 522 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 OR51S1Q8NGJ8 323 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 GTF2A1LQ9UNN4 478 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 HIF3AQ9Y2N7 669 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 NPIPB9F8W1W9 429 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 SDC3O75056 442 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 TMIGD3P0DMS9 266 aaPredicted RBP9.79□□□□□ -0.84
CCDC40-207ENST00000572253 FCARP24071 287 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 PGDP52209 483 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 EGR3Q06889 387 aa9.79□□□□□ -0.84
CCDC40-207ENST00000572253 EIF2B5Q13144 721 aaKnown RBP9.79□□□□□ -0.84
CCDC40-207ENST00000572253 UBXN2BQ14CS0 331 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms