RNA–Protein interactions for RNA: ENST00000568329.5

CSK-211, Transcript of C-terminal Src kinase, human

TSL 5

Gene CSK, Length 1,552 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSK-211	ENST00000568329	RPUSD3	Q6P087	351 aa	Known RBP	13.79	□□□□□ -0.2
CSK-211	ENST00000568329	SLC35D2	Q76EJ3	337 aa		13.79	□□□□□ -0.2
CSK-211	ENST00000568329	MEIOB	Q8N635	442 aa		13.79	□□□□□ -0.2
CSK-211	ENST00000568329	CYB561A3	Q8NBI2	242 aa		13.79	□□□□□ -0.2
CSK-211	ENST00000568329	NEIL3	Q8TAT5	605 aa		13.79	□□□□□ -0.2
CSK-211	ENST00000568329	SGCD	Q92629	289 aa		13.79	□□□□□ -0.2
CSK-211	ENST00000568329	ADGRG7	Q96K78	797 aa		13.79	□□□□□ -0.2
CSK-211	ENST00000568329	TEAD3	Q99594	435 aa		13.79	□□□□□ -0.2
CSK-211	ENST00000568329	ARHGAP9	Q9BRR9	750 aa		13.79	□□□□□ -0.2
CSK-211	ENST00000568329	SF3B5	Q9BWJ5	86 aa	Known RBP	13.79	□□□□□ -0.2
CSK-211	ENST00000568329	NMNAT2	Q9BZQ4	307 aa		13.79	□□□□□ -0.2
CSK-211	ENST00000568329	OR51V1	Q9H2C8	321 aa		13.79	□□□□□ -0.2
CSK-211	ENST00000568329	FGF20	Q9NP95	211 aa	Predicted RBP	13.79	□□□□□ -0.2
CSK-211	ENST00000568329	CHCHD3	Q9NX63	227 aa	Known RBP	13.79	□□□□□ -0.2
CSK-211	ENST00000568329	ZMIZ1	Q9ULJ6	1067 aa		13.79	□□□□□ -0.2
CSK-211	ENST00000568329	PRSS37	A4D1T9	235 aa		13.78	□□□□□ -0.2
CSK-211	ENST00000568329	PLG	P00747	810 aa	Predicted RBP	13.78	□□□□□ -0.2
CSK-211	ENST00000568329	NR2C1	P13056	603 aa		13.78	□□□□□ -0.2
CSK-211	ENST00000568329	ZNF708	P17019	499 aa		13.78	□□□□□ -0.2
CSK-211	ENST00000568329	MYL12A	P19105	171 aa		13.78	□□□□□ -0.2
CSK-211	ENST00000568329	ENPP1	P22413	925 aa		13.78	□□□□□ -0.2
CSK-211	ENST00000568329	CDKN2A	P42771	156 aa	Known RBP	13.78	□□□□□ -0.2
CSK-211	ENST00000568329	BLVRA	P53004	296 aa		13.78	□□□□□ -0.2
CSK-211	ENST00000568329	CLDN20	P56880	219 aa		13.78	□□□□□ -0.2
CSK-211	ENST00000568329	EMX1	Q04741	257 aa	Predicted RBP	13.78	□□□□□ -0.2
CSK-211	ENST00000568329	POMGNT2	Q8NAT1	580 aa		13.78	□□□□□ -0.2
CSK-211	ENST00000568329	BBS1	Q8NFJ9	593 aa		13.78	□□□□□ -0.2
CSK-211	ENST00000568329	FNDC8	Q8TC99	324 aa		13.78	□□□□□ -0.2
CSK-211	ENST00000568329	ASB10	Q8WXI3	467 aa		13.78	□□□□□ -0.2
CSK-211	ENST00000568329	ABTB1	Q969K4	478 aa	Predicted RBP	13.78	□□□□□ -0.2
CSK-211	ENST00000568329	RELT	Q969Z4	430 aa		13.78	□□□□□ -0.2
CSK-211	ENST00000568329	LGALS12	Q96DT0	336 aa		13.78	□□□□□ -0.2
CSK-211	ENST00000568329	ADAD1	Q96M93	576 aa	Known RBP	13.78	□□□□□ -0.2
CSK-211	ENST00000568329	LDAH	Q9H6V9	325 aa		13.78	□□□□□ -0.2
CSK-211	ENST00000568329	B3GAT1	Q9P2W7	334 aa		13.78	□□□□□ -0.2
CSK-211	ENST00000568329	LHX6	Q9UPM6	363 aa		13.78	□□□□□ -0.2
CSK-211	ENST00000568329	ERGIC3	Q9Y282	383 aa		13.78	□□□□□ -0.2
CSK-211	ENST00000568329	EXOG	Q9Y2C4	368 aa	Known RBP	13.78	□□□□□ -0.2
CSK-211	ENST00000568329	CACNA1G	O43497	2377 aa		13.77	□□□□□ -0.2
CSK-211	ENST00000568329	TRGV5	A0A0B4J1U4	118 aa		13.77	□□□□□ -0.21
CSK-211	ENST00000568329	SMIM31	A0A1B0GVY4	71 aa		13.77	□□□□□ -0.21
CSK-211	ENST00000568329	OR6C68	A6NDL8	312 aa		13.77	□□□□□ -0.21
CSK-211	ENST00000568329	ARHGEF9	O43307	516 aa		13.77	□□□□□ -0.21
CSK-211	ENST00000568329	IFNGR1	P15260	489 aa		13.77	□□□□□ -0.21
CSK-211	ENST00000568329	SPI1	P17947	270 aa		13.77	□□□□□ -0.21
CSK-211	ENST00000568329	PCMT1	P22061	227 aa		13.77	□□□□□ -0.21
CSK-211	ENST00000568329	C21orf33	P30042	268 aa	Predicted RBP	13.77	□□□□□ -0.21
CSK-211	ENST00000568329	LHX2	P50458	406 aa		13.77	□□□□□ -0.21
CSK-211	ENST00000568329	SLC16A1	P53985	500 aa		13.77	□□□□□ -0.21
CSK-211	ENST00000568329	PIGF	Q07326	219 aa		13.77	□□□□□ -0.21
CSK-211	ENST00000568329	DNM1P34	Q6PK57	102 aa		13.77	□□□□□ -0.21
CSK-211	ENST00000568329	GPAT4	Q86UL3	456 aa		13.77	□□□□□ -0.21
CSK-211	ENST00000568329	OR52I1	Q8NGK6	324 aa		13.77	□□□□□ -0.21
CSK-211	ENST00000568329	OR10D3	Q8NH80	312 aa		13.77	□□□□□ -0.21
CSK-211	ENST00000568329	RORB	Q92753	470 aa		13.77	□□□□□ -0.21
CSK-211	ENST00000568329	MYCBP	Q99417	103 aa	Predicted RBP	13.77	□□□□□ -0.21
CSK-211	ENST00000568329	JAM3	Q9BX67	310 aa		13.77	□□□□□ -0.21
CSK-211	ENST00000568329	HCAR1	Q9BXC0	346 aa		13.77	□□□□□ -0.21
CSK-211	ENST00000568329	FAM192A	Q9GZU8	254 aa		13.77	□□□□□ -0.21
CSK-211	ENST00000568329	SLC6A15	Q9H2J7	730 aa		13.77	□□□□□ -0.21
CSK-211	ENST00000568329	MED20	Q9H944	212 aa		13.77	□□□□□ -0.21
CSK-211	ENST00000568329	ACOT13	Q9NPJ3	140 aa		13.77	□□□□□ -0.21
CSK-211	ENST00000568329	INPP5E	Q9NRR6	644 aa		13.77	□□□□□ -0.21
CSK-211	ENST00000568329	VSX1	Q9NZR4	365 aa	Predicted RBP	13.77	□□□□□ -0.21
CSK-211	ENST00000568329	EXOSC1	Q9Y3B2	195 aa	Known RBP	13.77	□□□□□ -0.21
CSK-211	ENST00000568329	FKBP7	Q9Y680	259 aa		13.77	□□□□□ -0.21
CSK-211	ENST00000568329	COMMD3-BMI1	R4GMX3	469 aa		13.77	□□□□□ -0.21
CSK-211	ENST00000568329		A6NHS1	94 aa		13.76	□□□□□ -0.21
CSK-211	ENST00000568329	CENPBD1	B2RD01	187 aa		13.76	□□□□□ -0.21
CSK-211	ENST00000568329	AKAP8	O43823	692 aa	Known RBP	13.76	□□□□□ -0.21
CSK-211	ENST00000568329	GLCE	O94923	617 aa		13.76	□□□□□ -0.21
CSK-211	ENST00000568329	IGHG3	P01860	377 aa		13.76	□□□□□ -0.21
CSK-211	ENST00000568329	CRABP1	P29762	137 aa		13.76	□□□□□ -0.21
CSK-211	ENST00000568329	EIF1AX	P47813	144 aa	Known RBP	13.76	□□□□□ -0.21
CSK-211	ENST00000568329	CLDN18	P56856	261 aa		13.76	□□□□□ -0.21
CSK-211	ENST00000568329	ACTC1	P68032	377 aa		13.76	□□□□□ -0.21
CSK-211	ENST00000568329	ACTA1	P68133	377 aa		13.76	□□□□□ -0.21
CSK-211	ENST00000568329	GGTLC2	Q14390	218 aa		13.76	□□□□□ -0.21
CSK-211	ENST00000568329	IRF3	Q14653	427 aa		13.76	□□□□□ -0.21
CSK-211	ENST00000568329	NEDD8	Q15843	81 aa		13.76	□□□□□ -0.21
CSK-211	ENST00000568329	NADK2	Q4G0N4	442 aa		13.76	□□□□□ -0.21
CSK-211	ENST00000568329	GTF2IRD2B	Q6EKJ0	949 aa		13.76	□□□□□ -0.21
CSK-211	ENST00000568329	XAF1	Q6GPH4	301 aa		13.76	□□□□□ -0.21
CSK-211	ENST00000568329	GPR141	Q7Z602	305 aa		13.76	□□□□□ -0.21
CSK-211	ENST00000568329	GTF2IRD2	Q86UP8	949 aa		13.76	□□□□□ -0.21
CSK-211	ENST00000568329	UBQLNL	Q8IYU4	475 aa		13.76	□□□□□ -0.21
CSK-211	ENST00000568329	KDM8	Q8N371	416 aa		13.76	□□□□□ -0.21
CSK-211	ENST00000568329	OR9Q1	Q8NGQ5	310 aa		13.76	□□□□□ -0.21
CSK-211	ENST00000568329	KISS1R	Q969F8	398 aa	Predicted RBP	13.76	□□□□□ -0.21
CSK-211	ENST00000568329	PNPLA2	Q96AD5	504 aa		13.76	□□□□□ -0.21
CSK-211	ENST00000568329	ALG12	Q9BV10	488 aa		13.76	□□□□□ -0.21
CSK-211	ENST00000568329	RACGAP1	Q9H0H5	632 aa		13.76	□□□□□ -0.21
CSK-211	ENST00000568329	EXO5	Q9H790	373 aa		13.76	□□□□□ -0.21
CSK-211	ENST00000568329	RPRD1B	Q9NQG5	326 aa	Known RBP	13.76	□□□□□ -0.21
CSK-211	ENST00000568329	TNFRSF10D	Q9UBN6	386 aa		13.76	□□□□□ -0.21
CSK-211	ENST00000568329	DPPA5	A6NC42	116 aa		13.75	□□□□□ -0.21
CSK-211	ENST00000568329	CCDC182	A6NF36	153 aa		13.75	□□□□□ -0.21
CSK-211	ENST00000568329	NPIPA2	E9PIF3	369 aa		13.75	□□□□□ -0.21
CSK-211	ENST00000568329	NPIPA3	F8WFD2	350 aa		13.75	□□□□□ -0.21
CSK-211	ENST00000568329	TRAF3IP2	O43734	574 aa	Predicted RBP	13.75	□□□□□ -0.21

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