RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 MRM2Q9UI43 246 aaKnown RBP12.74□□□□□ -0.37
VPS9D1-202ENST00000561976 ATG2BQ96BY7 2078 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 A0A087WUJ7 227 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 TVP23AA6NH52 213 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 D6RAR5 112 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 H0YC42 278 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 RASGRP1O95267 797 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 CSTAP01040 98 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 IGF2P01344 180 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 CALCRP30988 508 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 AQP2P41181 271 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 PGDP52209 483 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 ZNF684Q5T5D7 378 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 ZNF660Q6AZW8 331 aaPredicted RBP12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 SLC16A9Q7RTY1 509 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 HSD17B13Q7Z5P4 300 aaPredicted RBP12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 OR51D1Q8NGF3 324 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 FLVCR1-AS1Q8TAF5 88 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 TMEM106AQ96A25 262 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 CTHRC1Q96CG8 243 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 CFHR5Q9BXR6 569 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 SLC6A17Q9H1V8 727 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 TRAV18A0A075B6X5 111 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 POM121BA6NF01 834 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 UPK3AO75631 287 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 GRK6P43250 576 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 SEC13P55735 322 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 PRPS1P60891 318 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 CA13Q8N1Q1 262 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 RELL2Q8NC24 303 aaPredicted RBP12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 OR5M9Q8NGP3 310 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 OR1E3Q8WZA6 343 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 FGF13Q92913 245 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 DVL3Q92997 716 aaPredicted RBP12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 TSACCQ96A04 125 aaPredicted RBP12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 CCDC74AQ96AQ1 378 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 ULBP3Q9BZM4 244 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 COMMD4Q9H0A8 199 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 STEAP1Q9UHE8 339 aa12.73□□□□□ -0.37
VPS9D1-202ENST00000561976 GGT3PA6NGU5 568 aa12.72□□□□□ -0.37
VPS9D1-202ENST00000561976 TNFSF14O43557 240 aa12.72□□□□□ -0.37
VPS9D1-202ENST00000561976 AKAIN1P0CW23 69 aa12.72□□□□□ -0.37
VPS9D1-202ENST00000561976 RUNX3Q13761 415 aa12.72□□□□□ -0.37
VPS9D1-202ENST00000561976 ENPP2Q13822 863 aa12.72□□□□□ -0.37
VPS9D1-202ENST00000561976 UBXN2BQ14CS0 331 aa12.72□□□□□ -0.37
VPS9D1-202ENST00000561976 ZNF776Q68DI1 518 aaPredicted RBP12.72□□□□□ -0.37
VPS9D1-202ENST00000561976 OR6N1Q8NGY5 312 aa12.72□□□□□ -0.37
VPS9D1-202ENST00000561976 OR10AC1Q8NH08 325 aa12.72□□□□□ -0.37
VPS9D1-202ENST00000561976 ANKRD9Q96BM1 317 aaPredicted RBP12.72□□□□□ -0.37
VPS9D1-202ENST00000561976 LAMP5Q9UJQ1 280 aa12.72□□□□□ -0.37
VPS9D1-202ENST00000561976 HRH3Q9Y5N1 445 aa12.72□□□□□ -0.37
VPS9D1-202ENST00000561976 MTRF1O75570 445 aaKnown RBP12.72□□□□□ -0.37
VPS9D1-202ENST00000561976 RLN2P04090 185 aa12.72□□□□□ -0.37
VPS9D1-202ENST00000561976 EFNB2P52799 333 aa12.72□□□□□ -0.37
VPS9D1-202ENST00000561976 KCNAB1Q14722 419 aa12.72□□□□□ -0.37
VPS9D1-202ENST00000561976 OR6N2Q8NGY6 317 aa12.72□□□□□ -0.37
VPS9D1-202ENST00000561976 ZNF417Q8TAU3 575 aa12.72□□□□□ -0.37
VPS9D1-202ENST00000561976 DUSP19Q8WTR2 217 aa12.72□□□□□ -0.37
VPS9D1-202ENST00000561976 CHST6Q9GZX3 395 aa12.72□□□□□ -0.37
VPS9D1-202ENST00000561976 EXOSC3Q9NQT5 275 aaKnown RBP12.72□□□□□ -0.37
VPS9D1-202ENST00000561976 H7C1C5 153 aa12.71□□□□□ -0.37
VPS9D1-202ENST00000561976 RDH16O75452 317 aa12.71□□□□□ -0.37
VPS9D1-202ENST00000561976 FBXO45P0C2W1 286 aa12.71□□□□□ -0.37
VPS9D1-202ENST00000561976 RPS27P42677 84 aaKnown RBP12.71□□□□□ -0.37
VPS9D1-202ENST00000561976 CTXN1P60606 82 aa12.71□□□□□ -0.37
VPS9D1-202ENST00000561976 LCN6P62502 163 aa12.71□□□□□ -0.37
VPS9D1-202ENST00000561976 RCBTB1Q8NDN9 531 aa12.71□□□□□ -0.37
VPS9D1-202ENST00000561976 OR51A4Q8NGJ6 313 aa12.71□□□□□ -0.37
VPS9D1-202ENST00000561976 APMAPQ9HDC9 416 aa12.71□□□□□ -0.37
VPS9D1-202ENST00000561976 IFT46Q9NQC8 304 aa12.71□□□□□ -0.37
VPS9D1-202ENST00000561976 LRIT1Q9P2V4 623 aa12.71□□□□□ -0.37
VPS9D1-202ENST00000561976 TRBV5-5A0A0J9YX44 114 aa12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 ELOA3DA6NLF2 546 aaPredicted RBP12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 CTAG2O75638 210 aa12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 AQP8O94778 261 aa12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 PLATP00750 562 aa12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 CD3DP04234 171 aa12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 F13BP05160 661 aa12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 SLC35E2P0CK97 266 aa12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 FNTBP49356 437 aa12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 SRSF5Q13243 272 aaKnown RBP12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 ELOA3BQ3SY89 546 aa12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 TANGO2Q6ICL3 276 aa12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 ATRAIDQ6UW56 229 aa12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 C17orf107Q6ZR85 190 aa12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 CSNK1A1LQ8N752 337 aa12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 GATSQ8NAP1 163 aa12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 ELOA3Q8NG57 546 aa12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 SP7Q8TDD2 431 aaPredicted RBP12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 TSEN15Q8WW01 171 aaKnown RBP12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 SPACA7Q96KW9 195 aa12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 CCDC3Q9BQI4 270 aa12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 KCNK15Q9H427 330 aa12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 DTX4Q9Y2E6 619 aa12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 OR10H1Q9Y4A9 318 aa12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 CHD7Q9P2D1 2997 aa12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 PTPRSQ13332 1948 aa12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 TICRRQ7Z2Z1 1910 aa12.71□□□□□ -0.38
VPS9D1-202ENST00000561976 A0A1B0GW55 424 aa12.7□□□□□ -0.38
VPS9D1-202ENST00000561976 HRKO00198 91 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms